Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNTN1Q12860 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC027287.1-201ENST00000553115 1453 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNTN1Q12860 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNTN1Q12860 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNTN1Q12860 RNU6-444P-201ENST00000383988 108 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.75□□□□□ -1.81
CNTN1Q12860 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC008280.1-201ENST00000418851 412 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 RAC1P8-201ENST00000427086 527 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 FTH1P6-201ENST00000430768 320 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 HMGN2P31-201ENST00000432430 273 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 Z99714.1-201ENST00000450463 807 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.75□□□□□ -1.81
CNTN1Q12860 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC018635.1-201ENST00000468292 1030 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AC069528.1-202ENST00000482888 637 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AC006499.5-201ENST00000505037 514 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.75□□□□□ -1.81
CNTN1Q12860 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 RNA5SP135-201ENST00000517019 125 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 OR10V3P-201ENST00000525712 725 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 MIR4458-201ENST00000578872 75 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 MIR5708-201ENST00000579723 85 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC022069.1-201ENST00000582910 658 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AL137849.1-201ENST00000604767 169 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.75□□□□□ -1.81
CNTN1Q12860 AC010975.3-201ENST00000618727 978 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AC004777.1-201ENST00000624317 287 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AC119674.1-207ENST00000641355 633 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 ZNF663P-202ENST00000641770 1131 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.75□□□□□ -1.81
CNTN1Q12860 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CNTN1Q12860 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNTN1Q12860 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CNTN1Q12860 MFSD8-236ENST00000641509 4050 ntBASIC3.75□□□□□ -1.81
CNTN1Q12860 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
CNTN1Q12860 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.74□□□□□ -1.81
CNTN1Q12860 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CNTN1Q12860 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CNTN1Q12860 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CNTN1Q12860 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
CNTN1Q12860 RNU6-839P-201ENST00000363347 108 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 RNU6-707P-201ENST00000364647 95 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 ZNF603P-201ENST00000405613 487 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AL139098.1-201ENST00000407291 389 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 MIR1183-201ENST00000408856 89 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 RNA5SP44-201ENST00000410446 133 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CNTN1Q12860 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.74□□□□□ -1.81
CNTN1Q12860 AC233981.1-201ENST00000423224 461 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 RPP40P1-201ENST00000426762 456 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 USP12PY-201ENST00000427677 1064 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 HIGD1AP12-201ENST00000427832 281 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.74□□□□□ -1.81
CNTN1Q12860 HSPD1P21-201ENST00000436541 245 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 OR10R1P-201ENST00000441524 1141 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.74□□□□□ -1.81
CNTN1Q12860 RPS3AP46-201ENST00000448352 682 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AL009048.1-201ENST00000450437 298 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AP000893.1-201ENST00000474462 794 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AC106707.2-201ENST00000484182 374 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 RPL21P131-201ENST00000497298 483 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 DYNLL1P6-201ENST00000503440 264 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.74□□□□□ -1.81
CNTN1Q12860 AC010342.1-201ENST00000514047 877 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CNTN1Q12860 RN7SKP18-201ENST00000516005 275 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 RNU6-885P-201ENST00000516607 104 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AC008802.1-201ENST00000519121 791 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.74□□□□□ -1.81
CNTN1Q12860 IGKV2D-19-201ENST00000523346 262 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.74□□□□□ -1.81
CNTN1Q12860 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.74□□□□□ -1.81
CNTN1Q12860 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.74□□□□□ -1.81
CNTN1Q12860 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.74□□□□□ -1.81
CNTN1Q12860 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.74□□□□□ -1.81
CNTN1Q12860 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.74□□□□□ -1.81
CNTN1Q12860 MTND1P8-201ENST00000571424 950 ntBASIC3.74□□□□□ -1.81
CNTN1Q12860 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms