Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC139713.2-214ENST00000642059 1811 ntBASIC3.57□□□□□ -1.84
CBX1P83916 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CBX1P83916 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CBX1P83916 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.56□□□□□ -1.84
CBX1P83916 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CBX1P83916 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.56□□□□□ -1.84
CBX1P83916 MTCO1P4-201ENST00000520516 1409 ntBASIC3.56□□□□□ -1.84
CBX1P83916 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CBX1P83916 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.56□□□□□ -1.84
CBX1P83916 RNU6-441P-201ENST00000384545 106 ntBASIC3.56□□□□□ -1.84
CBX1P83916 SNORA26.7-201ENST00000391288 122 ntBASIC3.56□□□□□ -1.84
CBX1P83916 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 SFR1P1-201ENST00000403720 688 ntBASIC3.56□□□□□ -1.84
CBX1P83916 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.56□□□□□ -1.84
CBX1P83916 RPL26P29-201ENST00000415623 438 ntBASIC3.56□□□□□ -1.84
CBX1P83916 AC245054.2-201ENST00000415639 319 ntBASIC3.56□□□□□ -1.84
CBX1P83916 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 RPP40P1-201ENST00000426762 456 ntBASIC3.56□□□□□ -1.84
CBX1P83916 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 AC096632.1-201ENST00000427395 310 ntBASIC3.56□□□□□ -1.84
CBX1P83916 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.56□□□□□ -1.84
CBX1P83916 CYCSP43-201ENST00000438233 310 ntBASIC3.56□□□□□ -1.84
CBX1P83916 CBX1P1-201ENST00000440184 427 ntBASIC3.56□□□□□ -1.84
CBX1P83916 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 NOTCH2P1-201ENST00000443481 624 ntBASIC3.56□□□□□ -1.84
CBX1P83916 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 UQCRHP3-201ENST00000451503 251 ntBASIC3.56□□□□□ -1.84
CBX1P83916 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 PRDX3P4-201ENST00000470828 747 ntBASIC3.56□□□□□ -1.84
CBX1P83916 SYPL1P1-201ENST00000473622 768 ntBASIC3.56□□□□□ -1.84
CBX1P83916 AC006483.1-201ENST00000487308 313 ntBASIC3.56□□□□□ -1.84
CBX1P83916 SETP14-201ENST00000497538 873 ntBASIC3.56□□□□□ -1.84
CBX1P83916 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.56□□□□□ -1.84
CBX1P83916 AC108475.1-201ENST00000507880 950 ntBASIC3.56□□□□□ -1.84
CBX1P83916 SNORA31.9-201ENST00000516429 84 ntBASIC3.56□□□□□ -1.84
CBX1P83916 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.56□□□□□ -1.84
CBX1P83916 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.56□□□□□ -1.84
CBX1P83916 MTCYBP41-201ENST00000528913 1123 ntBASIC3.56□□□□□ -1.84
CBX1P83916 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.56□□□□□ -1.84
CBX1P83916 AC055876.1-202ENST00000567053 138 ntBASIC3.56□□□□□ -1.84
CBX1P83916 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.56□□□□□ -1.84
CBX1P83916 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 AL451074.6-201ENST00000608512 729 ntBASIC3.56□□□□□ -1.84
CBX1P83916 AC005156.1-201ENST00000613371 573 ntBASIC3.56□□□□□ -1.84
CBX1P83916 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CBX1P83916 AC011944.2-201ENST00000624440 683 ntBASIC3.56□□□□□ -1.84
CBX1P83916 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.56□□□□□ -1.84
CBX1P83916 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.56□□□□□ -1.84
CBX1P83916 AC110774.1-201ENST00000623567 2018 ntBASIC3.56□□□□□ -1.84
CBX1P83916 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CBX1P83916 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CBX1P83916 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.55□□□□□ -1.84
CBX1P83916 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CBX1P83916 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CBX1P83916 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CBX1P83916 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CBX1P83916 AL512283.1-201ENST00000606756 1384 ntBASIC3.55□□□□□ -1.84
CBX1P83916 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CBX1P83916 RNU6-600P-201ENST00000362524 99 ntBASIC3.55□□□□□ -1.84
CBX1P83916 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CBX1P83916 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CBX1P83916 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CBX1P83916 AL121972.1-201ENST00000402023 252 ntBASIC3.55□□□□□ -1.84
CBX1P83916 AC016397.1-201ENST00000412463 242 ntBASIC3.55□□□□□ -1.84
CBX1P83916 OR51A3P-201ENST00000413596 924 ntBASIC3.55□□□□□ -1.84
CBX1P83916 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.55□□□□□ -1.84
CBX1P83916 MTATP6P11-201ENST00000428071 670 ntBASIC3.55□□□□□ -1.84
CBX1P83916 RPL32P14-201ENST00000463196 378 ntBASIC3.55□□□□□ -1.84
CBX1P83916 AC008379.1-201ENST00000463655 464 ntBASIC3.55□□□□□ -1.84
CBX1P83916 RPL23AP67-201ENST00000465341 474 ntBASIC3.55□□□□□ -1.84
CBX1P83916 NDUFA5P9-201ENST00000472609 340 ntBASIC3.55□□□□□ -1.84
CBX1P83916 HMGB1P38-201ENST00000490557 577 ntBASIC3.55□□□□□ -1.84
CBX1P83916 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.55□□□□□ -1.84
CBX1P83916 RNA5SP76-201ENST00000516277 87 ntBASIC3.55□□□□□ -1.84
CBX1P83916 RN7SKP116-201ENST00000516902 319 ntBASIC3.55□□□□□ -1.84
CBX1P83916 MED28P5-201ENST00000528254 438 ntBASIC3.55□□□□□ -1.84
CBX1P83916 AP003168.1-201ENST00000530091 307 ntBASIC3.55□□□□□ -1.84
CBX1P83916 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CBX1P83916 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.55□□□□□ -1.84
CBX1P83916 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.55□□□□□ -1.84
CBX1P83916 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.55□□□□□ -1.84
CBX1P83916 PSMB7P1-201ENST00000556349 514 ntBASIC3.55□□□□□ -1.84
CBX1P83916 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.55□□□□□ -1.84
CBX1P83916 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.55□□□□□ -1.84
CBX1P83916 MIR4284-201ENST00000578924 81 ntBASIC3.55□□□□□ -1.84
CBX1P83916 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.55□□□□□ -1.84
CBX1P83916 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
CBX1P83916 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.55□□□□□ -1.84
CBX1P83916 AC004832.5-201ENST00000608677 401 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms