Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPL34P26-201ENST00000445636 354 ntBASIC3.46□□□□□ -1.86
TPM4P67936 AC069540.1-201ENST00000446320 988 ntBASIC3.46□□□□□ -1.86
TPM4P67936 RPL26P28-201ENST00000451325 435 ntBASIC3.46□□□□□ -1.86
TPM4P67936 RPL21P104-201ENST00000464143 478 ntBASIC3.46□□□□□ -1.86
TPM4P67936 RPL21P13-201ENST00000488305 481 ntBASIC3.46□□□□□ -1.86
TPM4P67936 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.46□□□□□ -1.86
TPM4P67936 MTND4LP31-201ENST00000514859 294 ntBASIC3.46□□□□□ -1.86
TPM4P67936 HIGD1AP3-201ENST00000515857 278 ntBASIC3.46□□□□□ -1.86
TPM4P67936 AC022616.2-201ENST00000523185 300 ntBASIC3.46□□□□□ -1.86
TPM4P67936 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.46□□□□□ -1.86
TPM4P67936 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.46□□□□□ -1.86
TPM4P67936 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.46□□□□□ -1.86
TPM4P67936 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.46□□□□□ -1.86
TPM4P67936 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.46□□□□□ -1.86
TPM4P67936 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.46□□□□□ -1.86
TPM4P67936 U3.45-201ENST00000607547 219 ntBASIC3.46□□□□□ -1.86
TPM4P67936 MIR378J-201ENST00000611988 109 ntBASIC3.46□□□□□ -1.86
TPM4P67936 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TPM4P67936 RNU6-156P-201ENST00000621869 107 ntBASIC3.46□□□□□ -1.86
TPM4P67936 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TPM4P67936 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.46□□□□□ -1.86
TPM4P67936 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.46□□□□□ -1.86
TPM4P67936 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.46□□□□□ -1.86
TPM4P67936 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
TPM4P67936 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TPM4P67936 AF117829.1-206ENST00000621883 3802 ntBASIC3.46□□□□□ -1.86
TPM4P67936 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.46□□□□□ -1.86
TPM4P67936 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TPM4P67936 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TPM4P67936 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TPM4P67936 AL161912.2-201ENST00000565707 3007 ntBASIC3.45□□□□□ -1.86
TPM4P67936 FAM35CP-201ENST00000554755 2470 ntBASIC3.45□□□□□ -1.86
TPM4P67936 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TPM4P67936 U8.9-201ENST00000365667 134 ntBASIC3.45□□□□□ -1.86
TPM4P67936 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TPM4P67936 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TPM4P67936 RN7SKP159-201ENST00000410657 292 ntBASIC3.45□□□□□ -1.86
TPM4P67936 RNU2-71P-201ENST00000411395 189 ntBASIC3.45□□□□□ -1.86
TPM4P67936 BX323014.1-201ENST00000412876 237 ntBASIC3.45□□□□□ -1.86
TPM4P67936 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.45□□□□□ -1.86
TPM4P67936 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.45□□□□□ -1.86
TPM4P67936 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.45□□□□□ -1.86
TPM4P67936 SSXP4-201ENST00000451349 245 ntBASIC3.45□□□□□ -1.86
TPM4P67936 AP004217.1-201ENST00000480579 346 ntBASIC3.45□□□□□ -1.86
TPM4P67936 RN7SL499P-201ENST00000481141 276 ntBASIC3.45□□□□□ -1.86
TPM4P67936 AC021678.1-201ENST00000505195 936 ntBASIC3.45□□□□□ -1.86
TPM4P67936 OR5B10P-201ENST00000532869 642 ntBASIC3.45□□□□□ -1.86
TPM4P67936 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
TPM4P67936 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.45□□□□□ -1.86
TPM4P67936 AC091488.1-201ENST00000604239 660 ntBASIC3.45□□□□□ -1.86
TPM4P67936 OR2BH1P-201ENST00000608850 864 ntBASIC3.45□□□□□ -1.86
TPM4P67936 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.45□□□□□ -1.86
TPM4P67936 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.45□□□□□ -1.86
TPM4P67936 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.45□□□□□ -1.86
TPM4P67936 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.45□□□□□ -1.86
TPM4P67936 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.45□□□□□ -1.86
TPM4P67936 AC116096.1-201ENST00000566804 2314 ntBASIC3.44□□□□□ -1.86
TPM4P67936 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TPM4P67936 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TPM4P67936 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TPM4P67936 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TPM4P67936 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TPM4P67936 RNU4-31P-201ENST00000384211 141 ntBASIC3.44□□□□□ -1.86
TPM4P67936 RNU6ATAC-201ENST00000408749 126 ntBASIC3.44□□□□□ -1.86
TPM4P67936 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.44□□□□□ -1.86
TPM4P67936 HSFY4P-201ENST00000415994 1181 ntBASIC3.44□□□□□ -1.86
TPM4P67936 LINC01881-201ENST00000416103 412 ntBASIC3.44□□□□□ -1.86
TPM4P67936 TOMM22P1-201ENST00000418578 312 ntBASIC3.44□□□□□ -1.86
TPM4P67936 OR1AA1P-201ENST00000419597 916 ntBASIC3.44□□□□□ -1.86
TPM4P67936 AL445584.1-201ENST00000431451 330 ntBASIC3.44□□□□□ -1.86
TPM4P67936 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TPM4P67936 TRIM60P18-201ENST00000441518 828 ntBASIC3.44□□□□□ -1.86
TPM4P67936 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.44□□□□□ -1.86
TPM4P67936 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.44□□□□□ -1.86
TPM4P67936 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.44□□□□□ -1.86
TPM4P67936 AC110794.1-201ENST00000505816 425 ntBASIC3.44□□□□□ -1.86
TPM4P67936 PAICSP4-201ENST00000517543 1253 ntBASIC3.44□□□□□ -1.86
TPM4P67936 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.44□□□□□ -1.86
TPM4P67936 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.44□□□□□ -1.86
TPM4P67936 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.44□□□□□ -1.86
TPM4P67936 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.44□□□□□ -1.86
TPM4P67936 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
TPM4P67936 AL121772.2-201ENST00000614331 297 ntBASIC3.44□□□□□ -1.86
TPM4P67936 AL392088.2-201ENST00000637607 285 ntBASIC3.44□□□□□ -1.86
TPM4P67936 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TPM4P67936 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
TPM4P67936 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
TPM4P67936 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TPM4P67936 RNA5SP50-201ENST00000363731 107 ntBASIC3.43□□□□□ -1.86
TPM4P67936 RN7SKP280-201ENST00000364196 304 ntBASIC3.43□□□□□ -1.86
TPM4P67936 RPL7P25-201ENST00000404151 721 ntBASIC3.43□□□□□ -1.86
TPM4P67936 RPL5P18-201ENST00000406671 891 ntBASIC3.43□□□□□ -1.86
TPM4P67936 RNU2-65P-201ENST00000410162 185 ntBASIC3.43□□□□□ -1.86
TPM4P67936 RNU2-6P-201ENST00000411404 190 ntBASIC3.43□□□□□ -1.86
TPM4P67936 AL139281.1-201ENST00000422120 335 ntBASIC3.43□□□□□ -1.86
TPM4P67936 RPL21P110-201ENST00000433345 446 ntBASIC3.43□□□□□ -1.86
TPM4P67936 RPL36AP33-201ENST00000450395 310 ntBASIC3.43□□□□□ -1.86
TPM4P67936 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.43□□□□□ -1.86
TPM4P67936 HMGN1P8-201ENST00000463578 288 ntBASIC3.43□□□□□ -1.86
TPM4P67936 RPL5P24-201ENST00000463742 885 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms