Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MIR142-201ENST00000384835 87 ntBASIC1.88□□□□□ -2.11
RPS28P62857 RNA5SP424-201ENST00000390988 115 ntBASIC1.88□□□□□ -2.11
RPS28P62857 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC1.88□□□□□ -2.11
RPS28P62857 FNDC3CP-201ENST00000420795 1155 ntBASIC1.88□□□□□ -2.11
RPS28P62857 AC069157.1-201ENST00000421749 137 ntBASIC1.88□□□□□ -2.11
RPS28P62857 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC1.88□□□□□ -2.11
RPS28P62857 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC1.88□□□□□ -2.11
RPS28P62857 AP001324.1-201ENST00000428553 399 ntBASIC1.88□□□□□ -2.11
RPS28P62857 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.88□□□□□ -2.11
RPS28P62857 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC1.88□□□□□ -2.11
RPS28P62857 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC1.88□□□□□ -2.11
RPS28P62857 MTND2P19-201ENST00000449129 1012 ntBASIC1.88□□□□□ -2.11
RPS28P62857 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC1.88□□□□□ -2.11
RPS28P62857 AL445991.1-201ENST00000450381 475 ntBASIC1.88□□□□□ -2.11
RPS28P62857 RN7SL547P-201ENST00000490793 290 ntBASIC1.88□□□□□ -2.11
RPS28P62857 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.88□□□□□ -2.11
RPS28P62857 NDUFB4P2-201ENST00000509515 391 ntBASIC1.88□□□□□ -2.11
RPS28P62857 MRPS36P2-201ENST00000512569 299 ntBASIC1.88□□□□□ -2.11
RPS28P62857 BTF3P12-201ENST00000519620 469 ntBASIC1.88□□□□□ -2.11
RPS28P62857 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC1.88□□□□□ -2.11
RPS28P62857 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC1.88□□□□□ -2.11
RPS28P62857 ATP5F1P5-201ENST00000526403 760 ntBASIC1.88□□□□□ -2.11
RPS28P62857 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.88□□□□□ -2.11
RPS28P62857 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.88□□□□□ -2.11
RPS28P62857 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC1.88□□□□□ -2.11
RPS28P62857 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC1.88□□□□□ -2.11
RPS28P62857 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.88□□□□□ -2.11
RPS28P62857 AC079905.1-201ENST00000549280 475 ntBASIC1.88□□□□□ -2.11
RPS28P62857 PRELID2P1-201ENST00000552837 301 ntBASIC1.88□□□□□ -2.11
RPS28P62857 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC1.88□□□□□ -2.11
RPS28P62857 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RPS28P62857 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC1.88□□□□□ -2.11
RPS28P62857 MIR3922-201ENST00000585192 84 ntBASIC1.88□□□□□ -2.11
RPS28P62857 AC083964.1-201ENST00000607549 630 ntBASIC1.88□□□□□ -2.11
RPS28P62857 AC005332.10-201ENST00000612725 619 ntBASIC1.88□□□□□ -2.11
RPS28P62857 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC1.88□□□□□ -2.11
RPS28P62857 uc_338.29-201ENST00000615099 168 ntBASIC1.88□□□□□ -2.11
RPS28P62857 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.88□□□□□ -2.11
RPS28P62857 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC1.88□□□□□ -2.11
RPS28P62857 AL031601.2-202ENST00000622650 282 ntBASIC1.88□□□□□ -2.11
RPS28P62857 AC012640.5-201ENST00000623897 319 ntBASIC1.88□□□□□ -2.11
RPS28P62857 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.88□□□□□ -2.11
RPS28P62857 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
RPS28P62857 AC009812.4-201ENST00000569134 1805 ntBASIC1.88□□□□□ -2.11
RPS28P62857 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RPS28P62857 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.88□□□□□ -2.11
RPS28P62857 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
RPS28P62857 AC010680.1-201ENST00000590024 3590 ntBASIC1.88□□□□□ -2.11
RPS28P62857 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.88□□□□□ -2.11
RPS28P62857 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.88□□□□□ -2.11
RPS28P62857 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RPS28P62857 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
RPS28P62857 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
RPS28P62857 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.87□□□□□ -2.11
RPS28P62857 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RPS28P62857 AP002784.2-201ENST00000397300 549 ntBASIC1.87□□□□□ -2.11
RPS28P62857 CYCSP45-201ENST00000402289 315 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AL355497.1-201ENST00000406262 551 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 HMGB3P31-201ENST00000413333 595 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC1.87□□□□□ -2.11
RPS28P62857 MTND1P23-201ENST00000416931 372 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 UBE2V1P13-201ENST00000436983 439 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC1.87□□□□□ -2.11
RPS28P62857 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 SDAD1P2-201ENST00000441308 2028 ntBASIC1.87□□□□□ -2.11
RPS28P62857 COX6CP12-201ENST00000446748 202 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AL358232.1-201ENST00000448030 501 ntBASIC1.87□□□□□ -2.11
RPS28P62857 RPS15AP27-201ENST00000449183 343 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC1.87□□□□□ -2.11
RPS28P62857 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 RN7SL254P-201ENST00000460609 284 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AC087588.1-201ENST00000462203 316 ntBASIC1.87□□□□□ -2.11
RPS28P62857 MTND4LP3-201ENST00000468320 276 ntBASIC1.87□□□□□ -2.11
RPS28P62857 RN7SL594P-201ENST00000470590 287 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RPS28P62857 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
RPS28P62857 RNU6-202P-201ENST00000515998 96 ntBASIC1.87□□□□□ -2.11
RPS28P62857 RNA5SP208-201ENST00000516156 78 ntBASIC1.87□□□□□ -2.11
RPS28P62857 IGLVVI-25-1-201ENST00000521893 249 ntBASIC1.87□□□□□ -2.11
RPS28P62857 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 AC012321.1-201ENST00000561622 1588 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AGGF1P5-201ENST00000567900 919 ntBASIC1.87□□□□□ -2.11
RPS28P62857 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC1.87□□□□□ -2.11
RPS28P62857 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 AC017100.2-201ENST00000584628 355 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 RPL23AP92-201ENST00000603609 255 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AC090948.1-201ENST00000607464 549 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AL121890.3-201ENST00000618494 516 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.87□□□□□ -2.11
RPS28P62857 CR392039.5-201ENST00000623201 510 ntBASIC1.87□□□□□ -2.11
RPS28P62857 AP006248.3-201ENST00000623580 594 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms