Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.24□□□□□ -1.89
VSX2P58304 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.24□□□□□ -1.89
VSX2P58304 AC104689.1-201ENST00000473356 768 ntBASIC3.24□□□□□ -1.89
VSX2P58304 FCF1P3-201ENST00000496394 590 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.24□□□□□ -1.89
VSX2P58304 HSPD1P15-201ENST00000505573 1122 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.24□□□□□ -1.89
VSX2P58304 AC023141.12-201ENST00000512399 199 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.24□□□□□ -1.89
VSX2P58304 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.24□□□□□ -1.89
VSX2P58304 MTND2P26-201ENST00000528255 1029 ntBASIC3.24□□□□□ -1.89
VSX2P58304 PTP4A1P6-201ENST00000531034 478 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.24□□□□□ -1.89
VSX2P58304 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.24□□□□□ -1.89
VSX2P58304 AC012254.4-201ENST00000588843 273 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AL392112.1-201ENST00000605115 829 ntBASIC3.24□□□□□ -1.89
VSX2P58304 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.24□□□□□ -1.89
VSX2P58304 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.24□□□□□ -1.89
VSX2P58304 AC127502.3-201ENST00000636170 1206 ntBASIC3.24□□□□□ -1.89
VSX2P58304 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.24□□□□□ -1.89
VSX2P58304 MIR7153-201ENST00000637758 57 ntBASIC3.24□□□□□ -1.89
VSX2P58304 MTND5P1-201ENST00000445440 1375 ntBASIC3.24□□□□□ -1.89
VSX2P58304 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.24□□□□□ -1.89
VSX2P58304 AL592494.2-201ENST00000425455 1548 ntBASIC3.24□□□□□ -1.89
VSX2P58304 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VSX2P58304 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.24□□□□□ -1.89
VSX2P58304 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VSX2P58304 ZNF542P-204ENST00000482727 1305 ntBASIC3.23□□□□□ -1.89
VSX2P58304 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VSX2P58304 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.23□□□□□ -1.89
VSX2P58304 ZNF826P-207ENST00000622273 1910 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AC073346.2-201ENST00000624724 2058 ntBASIC3.23□□□□□ -1.89
VSX2P58304 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VSX2P58304 AP002088.1-201ENST00000382740 395 ntBASIC3.23□□□□□ -1.89
VSX2P58304 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.23□□□□□ -1.89
VSX2P58304 RN7SKP111-201ENST00000410349 271 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AL158825.1-201ENST00000414735 521 ntBASIC3.23□□□□□ -1.89
VSX2P58304 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AC023347.2-201ENST00000433994 462 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.23□□□□□ -1.89
VSX2P58304 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.23□□□□□ -1.89
VSX2P58304 RPS27P5-201ENST00000444247 244 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AC068135.1-201ENST00000446164 246 ntBASIC3.23□□□□□ -1.89
VSX2P58304 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.23□□□□□ -1.89
VSX2P58304 AC006539.3-201ENST00000454258 129 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AC007967.1-201ENST00000455422 1159 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AL358832.1-201ENST00000497800 389 ntBASIC3.23□□□□□ -1.89
VSX2P58304 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VSX2P58304 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.23□□□□□ -1.89
VSX2P58304 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.23□□□□□ -1.89
VSX2P58304 APOOP4-201ENST00000513530 597 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.23□□□□□ -1.89
VSX2P58304 RNU6-1102P-201ENST00000516149 96 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.23□□□□□ -1.89
VSX2P58304 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.23□□□□□ -1.89
VSX2P58304 AC008562.1-201ENST00000521763 330 ntBASIC3.23□□□□□ -1.89
VSX2P58304 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.23□□□□□ -1.89
VSX2P58304 C1DP5-201ENST00000525775 383 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.23□□□□□ -1.89
VSX2P58304 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.23□□□□□ -1.89
VSX2P58304 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VSX2P58304 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.23□□□□□ -1.89
VSX2P58304 MIR4276-201ENST00000584832 70 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.23□□□□□ -1.89
VSX2P58304 NTAN1P1-201ENST00000603150 646 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AL162713.1-201ENST00000604480 262 ntBASIC3.23□□□□□ -1.89
VSX2P58304 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VSX2P58304 AP001033.2-201ENST00000609701 1003 ntBASIC3.23□□□□□ -1.89
VSX2P58304 AL450489.1-201ENST00000612071 468 ntBASIC3.23□□□□□ -1.89
VSX2P58304 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.23□□□□□ -1.89
VSX2P58304 AC083865.1-201ENST00000636634 831 ntBASIC3.23□□□□□ -1.89
VSX2P58304 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.23□□□□□ -1.89
VSX2P58304 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
VSX2P58304 AC022031.1-201ENST00000585985 2593 ntBASIC3.23□□□□□ -1.89
VSX2P58304 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VSX2P58304 AC093010.3-201ENST00000570269 15214 ntBASIC3.23□□□□□ -1.89
VSX2P58304 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.22□□□□□ -1.89
VSX2P58304 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VSX2P58304 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.22□□□□□ -1.89
VSX2P58304 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VSX2P58304 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VSX2P58304 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VSX2P58304 SNORA9-201ENST00000384215 133 ntBASIC3.22□□□□□ -1.89
VSX2P58304 MIR153-1-201ENST00000384914 90 ntBASIC3.22□□□□□ -1.89
VSX2P58304 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VSX2P58304 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 HMGB3P31-201ENST00000413333 595 ntBASIC3.22□□□□□ -1.89
VSX2P58304 RPL31P45-201ENST00000419532 356 ntBASIC3.22□□□□□ -1.89
VSX2P58304 PNRC2P1-201ENST00000423940 420 ntBASIC3.22□□□□□ -1.89
VSX2P58304 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.22□□□□□ -1.89
VSX2P58304 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.22□□□□□ -1.89
VSX2P58304 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VSX2P58304 HMGN2P21-201ENST00000447764 270 ntBASIC3.22□□□□□ -1.89
VSX2P58304 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 RPL23AP67-201ENST00000465341 474 ntBASIC3.22□□□□□ -1.89
VSX2P58304 RPL6P9-201ENST00000466502 859 ntBASIC3.22□□□□□ -1.89
VSX2P58304 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.22□□□□□ -1.89
VSX2P58304 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms