Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
GFRA1P56159 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
GFRA1P56159 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
GFRA1P56159 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 AL121839.2-201ENST00000565058 6943 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
GFRA1P56159 SNORD81.2-201ENST00000365153 76 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.96□□□□□ -1.62
GFRA1P56159 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.96□□□□□ -1.62
GFRA1P56159 FABP7P1-201ENST00000424004 391 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 RPL35AP12-201ENST00000425362 338 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.96□□□□□ -1.62
GFRA1P56159 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 RPS17P13-201ENST00000448974 407 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.96□□□□□ -1.62
GFRA1P56159 IGHV5-78-201ENST00000450948 295 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.96□□□□□ -1.62
GFRA1P56159 snoU109.4-201ENST00000458953 143 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 GMFBP1-201ENST00000467831 427 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.96□□□□□ -1.62
GFRA1P56159 AC068305.1-201ENST00000497406 726 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 FGF7P4-201ENST00000509595 295 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 AC017037.2-201ENST00000513850 890 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 RN7SKP99-201ENST00000517028 307 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.96□□□□□ -1.62
GFRA1P56159 OR5B19P-201ENST00000531766 928 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.96□□□□□ -1.62
GFRA1P56159 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.96□□□□□ -1.62
GFRA1P56159 AC068831.4-201ENST00000556118 109 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.96□□□□□ -1.62
GFRA1P56159 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.96□□□□□ -1.62
GFRA1P56159 FKBP1AP1-201ENST00000594588 318 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.96□□□□□ -1.62
GFRA1P56159 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 AC010591.1-201ENST00000603941 649 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 AC093913.1-201ENST00000614178 329 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.96□□□□□ -1.62
GFRA1P56159 AP000843.1-201ENST00000624880 701 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
GFRA1P56159 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
GFRA1P56159 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 AC002525.1-201ENST00000624392 1622 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.96□□□□□ -1.62
GFRA1P56159 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
GFRA1P56159 AC093671.1-201ENST00000624981 2929 ntBASIC4.96□□□□□ -1.62
GFRA1P56159 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA1P56159 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
GFRA1P56159 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
GFRA1P56159 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 AC011155.1-201ENST00000316512 456 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
GFRA1P56159 RNA5SP183-201ENST00000362452 119 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 MIR454-201ENST00000390180 115 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 PDCL2P1-201ENST00000419302 352 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.95□□□□□ -1.62
GFRA1P56159 TAAR7P-201ENST00000436141 242 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 AC105399.1-202ENST00000447303 205 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 AZGP1P2-201ENST00000454506 345 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 COPS8P2-201ENST00000473228 627 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 RN7SL177P-201ENST00000476596 299 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.95□□□□□ -1.62
GFRA1P56159 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA1P56159 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.95□□□□□ -1.62
GFRA1P56159 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.95□□□□□ -1.62
GFRA1P56159 HIGD1AP3-201ENST00000515857 278 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 SNORD116-26-201ENST00000516006 96 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 SUB1P1-201ENST00000524415 382 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms