Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC00561-201ENST00000565815 2738 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC095050.2-201ENST00000510748 1458 ntBASIC3.92□□□□□ -1.78
CDH13P55290 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH13P55290 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH13P55290 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH13P55290 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH13P55290 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH13P55290 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH13P55290 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH13P55290 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH13P55290 RNU6-374P-201ENST00000364146 108 ntBASIC3.91□□□□□ -1.78
CDH13P55290 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH13P55290 RNU6-339P-201ENST00000384310 107 ntBASIC3.91□□□□□ -1.78
CDH13P55290 MT-TC-201ENST00000387405 66 ntBASIC3.91□□□□□ -1.78
CDH13P55290 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH13P55290 RNU11-4P-201ENST00000391149 133 ntBASIC3.91□□□□□ -1.78
CDH13P55290 TAF9BP1-201ENST00000396646 746 ntBASIC3.91□□□□□ -1.78
CDH13P55290 ARF4P3-201ENST00000397387 509 ntBASIC3.91□□□□□ -1.78
CDH13P55290 MTND4LP20-201ENST00000402379 270 ntBASIC3.91□□□□□ -1.78
CDH13P55290 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH13P55290 MIR1251-201ENST00000408552 70 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH13P55290 TIMM9P2-201ENST00000419324 266 ntBASIC3.91□□□□□ -1.78
CDH13P55290 MTCO2P21-201ENST00000419780 677 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC009480.2-201ENST00000422916 432 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH13P55290 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH13P55290 AC096638.2-201ENST00000434965 711 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AL356276.2-201ENST00000435919 558 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH13P55290 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH13P55290 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH13P55290 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH13P55290 RPL7P38-201ENST00000488396 739 ntBASIC3.91□□□□□ -1.78
CDH13P55290 RN7SL604P-201ENST00000492589 296 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH13P55290 AC034244.1-201ENST00000507687 207 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH13P55290 AC093840.1-201ENST00000511599 336 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH13P55290 RNU5A-4P-201ENST00000516588 111 ntBASIC3.91□□□□□ -1.78
CDH13P55290 RN7SKP116-201ENST00000516902 319 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AP003385.6-201ENST00000531603 374 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH13P55290 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH13P55290 AC087465.1-201ENST00000560574 245 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC009712.1-201ENST00000564938 316 ntBASIC3.91□□□□□ -1.78
CDH13P55290 MIR4330-201ENST00000579077 105 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH13P55290 BNIP3P24-201ENST00000593398 557 ntBASIC3.91□□□□□ -1.78
CDH13P55290 RPL23AP92-201ENST00000603609 255 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC025588.3-201ENST00000604182 274 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC092106.3-201ENST00000611308 722 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AL591424.2-201ENST00000617023 128 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AC011330.2-201ENST00000621680 635 ntBASIC3.91□□□□□ -1.78
CDH13P55290 MIR3653-201ENST00000625572 110 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH13P55290 ZNF876P-202ENST00000398732 1485 ntBASIC3.91□□□□□ -1.78
CDH13P55290 AL390862.1-201ENST00000635467 1469 ntBASIC3.91□□□□□ -1.78
CDH13P55290 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
CDH13P55290 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH13P55290 AP000776.1-201ENST00000530032 1663 ntBASIC3.9□□□□□ -1.78
CDH13P55290 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CDH13P55290 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH13P55290 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH13P55290 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH13P55290 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH13P55290 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CDH13P55290 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH13P55290 RNVU1-3-201ENST00000364313 161 ntBASIC3.9□□□□□ -1.79
CDH13P55290 RNU6-1122P-201ENST00000384449 107 ntBASIC3.9□□□□□ -1.79
CDH13P55290 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH13P55290 HSPE1P12-201ENST00000412576 301 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH13P55290 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.9□□□□□ -1.79
CDH13P55290 AL139421.1-201ENST00000423010 169 ntBASIC3.9□□□□□ -1.79
CDH13P55290 RPL23AP38-201ENST00000423801 469 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH13P55290 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH13P55290 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH13P55290 ATP5HP2-201ENST00000433885 485 ntBASIC3.9□□□□□ -1.79
CDH13P55290 KCTD9P3-201ENST00000434597 1169 ntBASIC3.9□□□□□ -1.79
CDH13P55290 RPL7P28-201ENST00000437739 740 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC092427.1-201ENST00000439177 601 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH13P55290 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH13P55290 ELOCP13-201ENST00000443934 329 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH13P55290 RPL39P6-201ENST00000448289 150 ntBASIC3.9□□□□□ -1.79
CDH13P55290 RPL38P1-201ENST00000460914 211 ntBASIC3.9□□□□□ -1.79
CDH13P55290 MTND1P16-201ENST00000465177 898 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH13P55290 RN7SL271P-201ENST00000487601 295 ntBASIC3.9□□□□□ -1.79
CDH13P55290 OR4G11P-201ENST00000492842 939 ntBASIC3.9□□□□□ -1.79
CDH13P55290 SETP14-201ENST00000497538 873 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH13P55290 AC093767.1-201ENST00000504523 156 ntBASIC3.9□□□□□ -1.79
CDH13P55290 MTCO3P44-201ENST00000510977 541 ntBASIC3.9□□□□□ -1.79
CDH13P55290 RN7SKP287-201ENST00000516546 266 ntBASIC3.9□□□□□ -1.79
CDH13P55290 MIR2114-201ENST00000516645 80 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms