Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDH6P55285 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH6P55285 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH6P55285 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH6P55285 MIR449B-201ENST00000384995 97 ntBASIC3.49□□□□□ -1.85
CDH6P55285 MIR591-201ENST00000385290 95 ntBASIC3.49□□□□□ -1.85
CDH6P55285 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CDH6P55285 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH6P55285 MIR1250-201ENST00000408098 113 ntBASIC3.49□□□□□ -1.85
CDH6P55285 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH6P55285 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH6P55285 AIMP1P1-201ENST00000418670 937 ntBASIC3.49□□□□□ -1.85
CDH6P55285 AC073310.1-201ENST00000423226 1033 ntBASIC3.49□□□□□ -1.85
CDH6P55285 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH6P55285 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH6P55285 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH6P55285 AL050321.1-201ENST00000432363 400 ntBASIC3.49□□□□□ -1.85
CDH6P55285 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH6P55285 HMGB1P45-201ENST00000435986 653 ntBASIC3.49□□□□□ -1.85
CDH6P55285 UBE2V1P5-201ENST00000440070 405 ntBASIC3.49□□□□□ -1.85
CDH6P55285 RPL6P5-201ENST00000445678 828 ntBASIC3.49□□□□□ -1.85
CDH6P55285 RPL26P28-201ENST00000451325 435 ntBASIC3.49□□□□□ -1.85
CDH6P55285 AC087312.1-201ENST00000471411 480 ntBASIC3.49□□□□□ -1.85
CDH6P55285 CYCSP20-201ENST00000473154 315 ntBASIC3.49□□□□□ -1.85
CDH6P55285 RN7SKP116-201ENST00000516902 319 ntBASIC3.49□□□□□ -1.85
CDH6P55285 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH6P55285 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH6P55285 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH6P55285 HMGN2P28-201ENST00000606102 262 ntBASIC3.49□□□□□ -1.85
CDH6P55285 PLCE1P1-201ENST00000622094 305 ntBASIC3.49□□□□□ -1.85
CDH6P55285 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH6P55285 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
CDH6P55285 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH6P55285 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH6P55285 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH6P55285 AC107081.3-201ENST00000612715 2034 ntBASIC3.49□□□□□ -1.85
CDH6P55285 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
CDH6P55285 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH6P55285 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH6P55285 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH6P55285 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH6P55285 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH6P55285 AL049781.1-201ENST00000623195 3585 ntBASIC3.48□□□□□ -1.85
CDH6P55285 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH6P55285 AC016716.1-201ENST00000265882 708 ntBASIC3.48□□□□□ -1.85
CDH6P55285 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH6P55285 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH6P55285 RNU6-1339P-201ENST00000363574 91 ntBASIC3.48□□□□□ -1.85
CDH6P55285 RNU6-1243P-201ENST00000364028 107 ntBASIC3.48□□□□□ -1.85
CDH6P55285 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
CDH6P55285 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDH6P55285 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH6P55285 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH6P55285 AC093578.1-201ENST00000415219 368 ntBASIC3.48□□□□□ -1.85
CDH6P55285 GLRXP1-201ENST00000423261 334 ntBASIC3.48□□□□□ -1.85
CDH6P55285 AC005517.2-201ENST00000424673 553 ntBASIC3.48□□□□□ -1.85
CDH6P55285 RPL21P110-201ENST00000433345 446 ntBASIC3.48□□□□□ -1.85
CDH6P55285 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH6P55285 AC006994.1-201ENST00000438212 839 ntBASIC3.48□□□□□ -1.85
CDH6P55285 AC004865.1-201ENST00000442276 1003 ntBASIC3.48□□□□□ -1.85
CDH6P55285 SLC31A1P1-201ENST00000451221 567 ntBASIC3.48□□□□□ -1.85
CDH6P55285 AC006539.3-201ENST00000454258 129 ntBASIC3.48□□□□□ -1.85
CDH6P55285 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH6P55285 RPS4XP22-201ENST00000480755 780 ntBASIC3.48□□□□□ -1.85
CDH6P55285 RPL31P13-201ENST00000484151 370 ntBASIC3.48□□□□□ -1.85
CDH6P55285 NCOR1P1-202ENST00000486162 291 ntBASIC3.48□□□□□ -1.85
CDH6P55285 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH6P55285 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH6P55285 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.48□□□□□ -1.85
CDH6P55285 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
CDH6P55285 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH6P55285 AP001636.2-201ENST00000525517 696 ntBASIC3.48□□□□□ -1.85
CDH6P55285 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH6P55285 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH6P55285 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH6P55285 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH6P55285 AC005476.1-201ENST00000554427 397 ntBASIC3.48□□□□□ -1.85
CDH6P55285 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH6P55285 AC007566.2-201ENST00000603642 413 ntBASIC3.48□□□□□ -1.85
CDH6P55285 AP003400.6-201ENST00000624698 740 ntBASIC3.48□□□□□ -1.85
CDH6P55285 AC092608.3-201ENST00000625017 386 ntBASIC3.48□□□□□ -1.85
CDH6P55285 AL356274.2-201ENST00000624379 3752 ntBASIC3.48□□□□□ -1.85
CDH6P55285 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDH6P55285 PABPC1P7-201ENST00000413177 1513 ntBASIC3.48□□□□□ -1.85
CDH6P55285 CR383658.2-201ENST00000547576 1525 ntBASIC3.48□□□□□ -1.85
CDH6P55285 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CDH6P55285 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH6P55285 AL353746.1-201ENST00000566293 6881 ntBASIC3.48□□□□□ -1.85
CDH6P55285 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CDH6P55285 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH6P55285 AL122126.1-201ENST00000546905 1318 ntBASIC3.47□□□□□ -1.85
CDH6P55285 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDH6P55285 ZNF826P-207ENST00000622273 1910 ntBASIC3.47□□□□□ -1.85
CDH6P55285 RNA5SP50-201ENST00000363731 107 ntBASIC3.47□□□□□ -1.85
CDH6P55285 MIR607-201ENST00000385241 96 ntBASIC3.47□□□□□ -1.85
CDH6P55285 ATP5F1P3-201ENST00000397213 657 ntBASIC3.47□□□□□ -1.85
CDH6P55285 DSTNP4-201ENST00000399472 474 ntBASIC3.47□□□□□ -1.85
CDH6P55285 AC244098.2-201ENST00000422068 99 ntBASIC3.47□□□□□ -1.85
CDH6P55285 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH6P55285 FAR1P1-201ENST00000427163 934 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms