Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNU6-347P-201ENST00000516658 105 ntBASIC4.63□□□□□ -1.67
COPB1P53618 NPM1P6-201ENST00000521088 871 ntBASIC4.63□□□□□ -1.67
COPB1P53618 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.63□□□□□ -1.67
COPB1P53618 AF279873.1-201ENST00000523393 313 ntBASIC4.63□□□□□ -1.67
COPB1P53618 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 PDCD5P1-201ENST00000543528 309 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AC063950.1-201ENST00000552036 308 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.63□□□□□ -1.67
COPB1P53618 ZNF415P1-201ENST00000582279 1166 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AL020997.2-201ENST00000602607 184 ntBASIC4.63□□□□□ -1.67
COPB1P53618 MTCYBP22-201ENST00000603788 447 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AL021997.1-201ENST00000605757 193 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AC092354.1-201ENST00000606057 376 ntBASIC4.63□□□□□ -1.67
COPB1P53618 AC106028.5-201ENST00000610332 395 ntBASIC4.63□□□□□ -1.67
COPB1P53618 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 AL445363.3-201ENST00000623080 671 ntBASIC4.63□□□□□ -1.67
COPB1P53618 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.63□□□□□ -1.67
COPB1P53618 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
COPB1P53618 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
COPB1P53618 MTND4P26-201ENST00000415971 1359 ntBASIC4.63□□□□□ -1.67
COPB1P53618 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COPB1P53618 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.62□□□□□ -1.67
COPB1P53618 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
COPB1P53618 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
COPB1P53618 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
COPB1P53618 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
COPB1P53618 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COPB1P53618 Y_RNA.18-201ENST00000362461 102 ntBASIC4.62□□□□□ -1.67
COPB1P53618 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COPB1P53618 MIR1284-201ENST00000408337 120 ntBASIC4.62□□□□□ -1.67
COPB1P53618 RN7SKP142-201ENST00000411236 328 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AL136133.1-201ENST00000413694 376 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AC092634.6-201ENST00000418558 192 ntBASIC4.62□□□□□ -1.67
COPB1P53618 MTCO2P34-201ENST00000421994 607 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AL356387.2-201ENST00000422272 243 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.62□□□□□ -1.67
COPB1P53618 MTND1P30-201ENST00000441241 901 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AL512326.1-201ENST00000443050 721 ntBASIC4.62□□□□□ -1.67
COPB1P53618 EEF1A1P1-201ENST00000447052 739 ntBASIC4.62□□□□□ -1.67
COPB1P53618 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.62□□□□□ -1.67
COPB1P53618 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COPB1P53618 RPL21P71-201ENST00000465598 459 ntBASIC4.62□□□□□ -1.67
COPB1P53618 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.62□□□□□ -1.67
COPB1P53618 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.62□□□□□ -1.67
COPB1P53618 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.62□□□□□ -1.67
COPB1P53618 AC079140.3-201ENST00000511111 550 ntBASIC4.62□□□□□ -1.67
COPB1P53618 RPL7L1P13-201ENST00000511702 739 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.62□□□□□ -1.67
COPB1P53618 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.62□□□□□ -1.67
COPB1P53618 IGLVIV-65-201ENST00000517313 360 ntBASIC4.62□□□□□ -1.67
COPB1P53618 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.62□□□□□ -1.67
COPB1P53618 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.62□□□□□ -1.67
COPB1P53618 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.62□□□□□ -1.67
COPB1P53618 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.62□□□□□ -1.67
COPB1P53618 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.62□□□□□ -1.67
COPB1P53618 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COPB1P53618 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
COPB1P53618 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.62□□□□□ -1.67
COPB1P53618 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.62□□□□□ -1.67
COPB1P53618 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.62□□□□□ -1.67
COPB1P53618 AC074051.3-201ENST00000570238 358 ntBASIC4.62□□□□□ -1.67
COPB1P53618 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.62□□□□□ -1.67
COPB1P53618 VN1R84P-201ENST00000593697 235 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AC020914.6-201ENST00000594327 272 ntBASIC4.62□□□□□ -1.67
COPB1P53618 U73023.1-201ENST00000603134 700 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AC069304.2-201ENST00000605154 435 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AL031775.1-201ENST00000607014 887 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AL121873.1-201ENST00000616013 524 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AC233309.1-201ENST00000619522 751 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AL359715.5-201ENST00000623431 443 ntBASIC4.62□□□□□ -1.67
COPB1P53618 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COPB1P53618 AC140479.6-201ENST00000633535 357 ntBASIC4.62□□□□□ -1.67
COPB1P53618 AC026634.1-201ENST00000634369 198 ntBASIC4.62□□□□□ -1.67
COPB1P53618 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.62□□□□□ -1.67
COPB1P53618 CDR1-202ENST00000625883 1485 ntBASIC4.62□□□□□ -1.67
COPB1P53618 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COPB1P53618 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.62□□□□□ -1.67
COPB1P53618 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.61□□□□□ -1.67
COPB1P53618 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.61□□□□□ -1.67
COPB1P53618 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.61□□□□□ -1.67
COPB1P53618 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
COPB1P53618 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.61□□□□□ -1.67
COPB1P53618 AC090017.1-201ENST00000548612 1779 ntBASIC4.61□□□□□ -1.67
COPB1P53618 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 OR10J6P-201ENST00000289731 930 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.61□□□□□ -1.67
COPB1P53618 AC019155.1-201ENST00000382242 574 ntBASIC4.61□□□□□ -1.67
COPB1P53618 RNA5SP332-201ENST00000391063 115 ntBASIC4.61□□□□□ -1.67
COPB1P53618 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COPB1P53618 EIF4A1P3-201ENST00000411521 244 ntBASIC4.61□□□□□ -1.67
COPB1P53618 JKAMPP1-201ENST00000413804 919 ntBASIC4.61□□□□□ -1.67
COPB1P53618 CYCSP46-201ENST00000423569 204 ntBASIC4.61□□□□□ -1.67
COPB1P53618 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms