Protein–RNA interactions for Protein: P53609

PGGT1B, Geranylgeranyl transferase type-1 subunit beta, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1BP53609 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.17□□□□□ -1.74
PGGT1BP53609 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.17□□□□□ -1.74
PGGT1BP53609 SNORA51.12-201ENST00000384448 134 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PGGT1BP53609 AL133264.1-201ENST00000407157 562 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 RNU2-66P-201ENST00000410650 161 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.17□□□□□ -1.74
PGGT1BP53609 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC234782.4-201ENST00000417646 1048 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PGGT1BP53609 RPS29P17-201ENST00000430795 166 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 OR2B8P-201ENST00000432841 938 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PGGT1BP53609 RPL12P46-201ENST00000436610 195 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AL450263.2-201ENST00000439400 589 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AC092641.1-201ENST00000440229 772 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.17□□□□□ -1.74
PGGT1BP53609 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC239809.1-201ENST00000450470 217 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.17□□□□□ -1.74
PGGT1BP53609 SUMO2P2-201ENST00000456482 255 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 RPL23AP24-201ENST00000458203 385 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC015724.1-201ENST00000478577 156 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 RPS29P19-201ENST00000479709 171 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AC096751.1-202ENST00000502691 1067 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC093824.1-201ENST00000508796 343 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 FABP5P5-201ENST00000515537 406 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 RNU6-405P-201ENST00000516637 110 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 HMGB1P19-201ENST00000517578 577 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.17□□□□□ -1.74
PGGT1BP53609 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.17□□□□□ -1.74
PGGT1BP53609 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC090515.3-201ENST00000560431 315 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC234778.2-201ENST00000566241 354 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC115085.1-201ENST00000588924 229 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AL390838.2-201ENST00000602394 274 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AC068276.1-201ENST00000605793 379 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC024560.3-201ENST00000608482 349 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.17□□□□□ -1.74
PGGT1BP53609 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.17□□□□□ -1.74
PGGT1BP53609 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.17□□□□□ -1.74
PGGT1BP53609 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.17□□□□□ -1.74
PGGT1BP53609 AC140479.6-201ENST00000633535 357 ntBASIC4.17□□□□□ -1.74
PGGT1BP53609 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.17□□□□□ -1.74
PGGT1BP53609 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.17□□□□□ -1.74
PGGT1BP53609 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.17□□□□□ -1.74
PGGT1BP53609 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PGGT1BP53609 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PGGT1BP53609 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PGGT1BP53609 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.17□□□□□ -1.74
PGGT1BP53609 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.16□□□□□ -1.74
PGGT1BP53609 AC011266.1-201ENST00000624119 3569 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PGGT1BP53609 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.16□□□□□ -1.74
PGGT1BP53609 USP9YP4-201ENST00000424401 1745 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
PGGT1BP53609 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PGGT1BP53609 OR10J6P-201ENST00000289731 930 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 Y_RNA.6-201ENST00000362350 114 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 RNU1-14P-201ENST00000362759 152 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 RNU6-582P-201ENST00000362989 107 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.16□□□□□ -1.74
PGGT1BP53609 RNU6-146P-201ENST00000384602 108 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 ZNF603P-201ENST00000405613 487 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 AC007899.1-201ENST00000412776 775 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.16□□□□□ -1.74
PGGT1BP53609 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.16□□□□□ -1.74
PGGT1BP53609 Z74696.2-201ENST00000436514 498 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 MTND2P20-201ENST00000440805 661 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 RPS7P5-201ENST00000441482 581 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 YWHAQP9-201ENST00000445891 512 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 PTMAP3-201ENST00000447474 330 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 AC006511.1-201ENST00000470614 315 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 AC109327.1-201ENST00000471666 403 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.16□□□□□ -1.74
PGGT1BP53609 MTND6P6-201ENST00000478031 263 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 AC041039.1-201ENST00000485656 536 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.16□□□□□ -1.74
PGGT1BP53609 AC006499.5-201ENST00000505037 514 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.16□□□□□ -1.74
PGGT1BP53609 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
PGGT1BP53609 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.16□□□□□ -1.74
PGGT1BP53609 KRT19P6-201ENST00000510983 209 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 MTCYBP43-201ENST00000513621 740 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.16□□□□□ -1.74
PGGT1BP53609 RNA5SP360-201ENST00000516555 118 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.16□□□□□ -1.74
PGGT1BP53609 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.16□□□□□ -1.74
PGGT1BP53609 MTCYBP41-201ENST00000528913 1123 ntBASIC4.16□□□□□ -1.74
PGGT1BP53609 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.16□□□□□ -1.74
PGGT1BP53609 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms