Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDX1P52945 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.88□□□□□ -1.79
PDX1P52945 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDX1P52945 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.88□□□□□ -1.79
PDX1P52945 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDX1P52945 SNORA60-201ENST00000362396 134 ntBASIC3.88□□□□□ -1.79
PDX1P52945 RNU6-492P-201ENST00000363035 104 ntBASIC3.88□□□□□ -1.79
PDX1P52945 RNU6-761P-201ENST00000384148 107 ntBASIC3.88□□□□□ -1.79
PDX1P52945 U8.11-201ENST00000384699 133 ntBASIC3.88□□□□□ -1.79
PDX1P52945 U8.12-201ENST00000384701 133 ntBASIC3.88□□□□□ -1.79
PDX1P52945 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.88□□□□□ -1.79
PDX1P52945 MTND2P16-201ENST00000419987 799 ntBASIC3.88□□□□□ -1.79
PDX1P52945 MTCO3P1-205ENST00000422088 832 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC010099.3-201ENST00000423896 409 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.88□□□□□ -1.79
PDX1P52945 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.88□□□□□ -1.79
PDX1P52945 YME1L1P1-201ENST00000429435 297 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AL358472.1-201ENST00000431295 329 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AL357520.1-201ENST00000441557 453 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 MTND1P31-201ENST00000449206 961 ntBASIC3.88□□□□□ -1.79
PDX1P52945 NANOGP10-201ENST00000453325 895 ntBASIC3.88□□□□□ -1.79
PDX1P52945 U8.18-201ENST00000459285 133 ntBASIC3.88□□□□□ -1.79
PDX1P52945 OR9M1P-201ENST00000459641 921 ntBASIC3.88□□□□□ -1.79
PDX1P52945 RPL5P24-201ENST00000463742 885 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AP000893.1-201ENST00000474462 794 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC087385.1-201ENST00000475062 312 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC025554.1-201ENST00000505641 188 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC005351.1-201ENST00000511152 786 ntBASIC3.88□□□□□ -1.79
PDX1P52945 RNA5SP154-201ENST00000516193 111 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.88□□□□□ -1.79
PDX1P52945 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 AP001189.2-201ENST00000527320 189 ntBASIC3.88□□□□□ -1.79
PDX1P52945 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDX1P52945 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.88□□□□□ -1.79
PDX1P52945 AC010198.2-201ENST00000550612 259 ntBASIC3.88□□□□□ -1.79
PDX1P52945 TRAV15-201ENST00000556680 249 ntBASIC3.88□□□□□ -1.79
PDX1P52945 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.88□□□□□ -1.79
PDX1P52945 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.88□□□□□ -1.79
PDX1P52945 MIR4504-201ENST00000577413 92 ntBASIC3.88□□□□□ -1.79
PDX1P52945 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 AC067852.4-201ENST00000590314 478 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 SNORA51-201ENST00000606420 132 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.88□□□□□ -1.79
PDX1P52945 AL451074.6-201ENST00000608512 729 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC092954.1-201ENST00000609121 445 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC131235.4-201ENST00000609288 620 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC231759.1-201ENST00000616455 597 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC244100.1-202ENST00000621554 382 ntBASIC3.88□□□□□ -1.79
PDX1P52945 MIR7702-201ENST00000621931 59 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC120349.3-201ENST00000624377 529 ntBASIC3.88□□□□□ -1.79
PDX1P52945 AC026634.1-201ENST00000634369 198 ntBASIC3.88□□□□□ -1.79
PDX1P52945 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDX1P52945 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDX1P52945 ERCC6-202ENST00000374127 1782 ntBASIC3.88□□□□□ -1.79
PDX1P52945 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
PDX1P52945 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDX1P52945 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PDX1P52945 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDX1P52945 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDX1P52945 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDX1P52945 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.87□□□□□ -1.79
PDX1P52945 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDX1P52945 FAM133CP-201ENST00000332869 704 ntBASIC3.87□□□□□ -1.79
PDX1P52945 MIR448-201ENST00000362131 111 ntBASIC3.87□□□□□ -1.79
PDX1P52945 RNU6-251P-201ENST00000363235 104 ntBASIC3.87□□□□□ -1.79
PDX1P52945 RNU6-441P-201ENST00000384545 106 ntBASIC3.87□□□□□ -1.79
PDX1P52945 MIR93-201ENST00000385024 80 ntBASIC3.87□□□□□ -1.79
PDX1P52945 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PDX1P52945 AL121978.1-201ENST00000402778 359 ntBASIC3.87□□□□□ -1.79
PDX1P52945 SNORA11.1-201ENST00000408133 129 ntBASIC3.87□□□□□ -1.79
PDX1P52945 RNA5SP39-201ENST00000411245 120 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AC068533.2-201ENST00000411872 306 ntBASIC3.87□□□□□ -1.79
PDX1P52945 MTND4P22-201ENST00000413116 1169 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 NPM1P34-201ENST00000428821 893 ntBASIC3.87□□□□□ -1.79
PDX1P52945 UBE2V1P1-201ENST00000430836 445 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 AC069285.2-201ENST00000440210 275 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.87□□□□□ -1.79
PDX1P52945 AL034418.1-201ENST00000448675 860 ntBASIC3.87□□□□□ -1.79
PDX1P52945 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 RAD23BP3-201ENST00000454157 1152 ntBASIC3.87□□□□□ -1.79
PDX1P52945 RPL36AP13-201ENST00000457490 317 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 AC087879.1-201ENST00000474343 374 ntBASIC3.87□□□□□ -1.79
PDX1P52945 AL139099.1-201ENST00000497398 403 ntBASIC3.87□□□□□ -1.79
PDX1P52945 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 AC021146.8-201ENST00000507455 733 ntBASIC3.87□□□□□ -1.79
PDX1P52945 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDX1P52945 AC116353.3-201ENST00000511215 249 ntBASIC3.87□□□□□ -1.79
PDX1P52945 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.87□□□□□ -1.79
PDX1P52945 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms