Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC007016.1-201ENST00000512110 244 ntBASIC4.71□□□□□ -1.66
NEK3P51956 MTND5P4-201ENST00000514978 288 ntBASIC4.71□□□□□ -1.66
NEK3P51956 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.71□□□□□ -1.66
NEK3P51956 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.71□□□□□ -1.66
NEK3P51956 AC024224.1-201ENST00000538284 609 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 AC105129.1-201ENST00000560250 297 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.71□□□□□ -1.66
NEK3P51956 AC010928.3-201ENST00000587712 541 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.71□□□□□ -1.66
NEK3P51956 RPL7P50-201ENST00000600588 727 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AC115286.1-201ENST00000604298 434 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AC128687.1-201ENST00000605304 619 ntBASIC4.71□□□□□ -1.66
NEK3P51956 HMGN2P28-201ENST00000606102 262 ntBASIC4.71□□□□□ -1.66
NEK3P51956 AP000676.3-201ENST00000623299 569 ntBASIC4.71□□□□□ -1.66
NEK3P51956 CRYM-AS1-204ENST00000637983 556 ntBASIC4.71□□□□□ -1.66
NEK3P51956 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NEK3P51956 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NEK3P51956 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
NEK3P51956 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NEK3P51956 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 ZNF137P-201ENST00000456718 1920 ntBASIC4.71□□□□□ -1.66
NEK3P51956 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.71□□□□□ -1.66
NEK3P51956 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEK3P51956 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.7□□□□□ -1.66
NEK3P51956 MAPK10-303ENST00000641324 3959 ntBASIC4.7□□□□□ -1.66
NEK3P51956 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
NEK3P51956 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 AL365440.1-201ENST00000436135 2167 ntBASIC4.7□□□□□ -1.66
NEK3P51956 Z98755.1-201ENST00000407015 1384 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AL445523.1-201ENST00000451184 1362 ntBASIC4.7□□□□□ -1.66
NEK3P51956 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 RNU6-1249P-201ENST00000363237 111 ntBASIC4.7□□□□□ -1.66
NEK3P51956 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.7□□□□□ -1.66
NEK3P51956 RNU1-32P-201ENST00000363937 159 ntBASIC4.7□□□□□ -1.66
NEK3P51956 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 MIR141-201ENST00000384975 95 ntBASIC4.7□□□□□ -1.66
NEK3P51956 MIR1305-201ENST00000408300 86 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.7□□□□□ -1.66
NEK3P51956 AC099677.1-201ENST00000420575 175 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AL391219.1-201ENST00000422570 483 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AL513174.1-201ENST00000423182 629 ntBASIC4.7□□□□□ -1.66
NEK3P51956 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.7□□□□□ -1.66
NEK3P51956 AL732292.1-201ENST00000426692 226 ntBASIC4.7□□□□□ -1.66
NEK3P51956 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.7□□□□□ -1.66
NEK3P51956 AC097262.1-201ENST00000452559 548 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.7□□□□□ -1.66
NEK3P51956 snoU13.1-201ENST00000459157 104 ntBASIC4.7□□□□□ -1.66
NEK3P51956 RPS4XP10-201ENST00000465034 731 ntBASIC4.7□□□□□ -1.66
NEK3P51956 RN7SL481P-201ENST00000477764 299 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AC093267.1-201ENST00000489176 961 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AC106872.3-201ENST00000495104 446 ntBASIC4.7□□□□□ -1.66
NEK3P51956 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.7□□□□□ -1.66
NEK3P51956 POU5F1P7-201ENST00000508759 541 ntBASIC4.7□□□□□ -1.66
NEK3P51956 OR51K1P-201ENST00000510214 950 ntBASIC4.7□□□□□ -1.66
NEK3P51956 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.7□□□□□ -1.66
NEK3P51956 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.7□□□□□ -1.66
NEK3P51956 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 OR5AP1P-201ENST00000529730 940 ntBASIC4.7□□□□□ -1.66
NEK3P51956 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.7□□□□□ -1.66
NEK3P51956 OR4P1P-201ENST00000530808 1136 ntBASIC4.7□□□□□ -1.66
NEK3P51956 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.7□□□□□ -1.66
NEK3P51956 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.7□□□□□ -1.66
NEK3P51956 DYNLL1P4-201ENST00000549314 266 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.7□□□□□ -1.66
NEK3P51956 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.7□□□□□ -1.66
NEK3P51956 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.7□□□□□ -1.66
NEK3P51956 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.7□□□□□ -1.66
NEK3P51956 MIR5096-201ENST00000583713 70 ntBASIC4.7□□□□□ -1.66
NEK3P51956 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.7□□□□□ -1.66
NEK3P51956 ELOCP28-201ENST00000590044 317 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AL133338.2-201ENST00000604292 736 ntBASIC4.7□□□□□ -1.66
NEK3P51956 AC112187.2-201ENST00000604345 283 ntBASIC4.7□□□□□ -1.66
NEK3P51956 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 AL451044.1-201ENST00000604867 238 ntBASIC4.7□□□□□ -1.66
NEK3P51956 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 AC010608.2-201ENST00000624830 470 ntBASIC4.7□□□□□ -1.66
NEK3P51956 U3.53-201ENST00000628922 216 ntBASIC4.7□□□□□ -1.66
NEK3P51956 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NEK3P51956 KARSP3-201ENST00000571212 1504 ntBASIC4.7□□□□□ -1.66
NEK3P51956 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.7□□□□□ -1.66
NEK3P51956 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.7□□□□□ -1.66
NEK3P51956 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.7□□□□□ -1.66
NEK3P51956 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEK3P51956 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms