Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCN3P51790 NBEAP1-201ENST00000554452 979 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCN3P51790 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.3□□□□□ -1.72
CLCN3P51790 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN3P51790 AL139344.1-201ENST00000605228 195 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN3P51790 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN3P51790 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN3P51790 AL139089.1-201ENST00000620372 975 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN3P51790 AC017037.3-201ENST00000625016 472 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN3P51790 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCN3P51790 AC027290.2-201ENST00000623210 18662 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCN3P51790 AL139811.1-201ENST00000424779 2299 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCN3P51790 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 RNU6-492P-201ENST00000363035 104 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCN3P51790 Y_RNA.465-201ENST00000384293 102 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.29□□□□□ -1.72
CLCN3P51790 SNORA3.3-201ENST00000408712 125 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 RNU2-21P-201ENST00000410368 188 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCN3P51790 RAB9AP3-201ENST00000412737 573 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCN3P51790 BOLA3P4-201ENST00000418151 400 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCN3P51790 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 AL138785.1-201ENST00000425821 331 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 USP9YP11-201ENST00000427537 717 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 YWHAZP8-201ENST00000436935 731 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.29□□□□□ -1.72
CLCN3P51790 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.29□□□□□ -1.72
CLCN3P51790 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCN3P51790 RAB9AP1-201ENST00000449393 573 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 NDUFA5P7-201ENST00000452914 242 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 RPL21P11-201ENST00000461458 483 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 RPS20P21-201ENST00000466859 343 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.29□□□□□ -1.72
CLCN3P51790 MTND2P14-201ENST00000482139 351 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 AC090071.1-201ENST00000507713 644 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCN3P51790 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCN3P51790 RNU6-1225P-201ENST00000516336 65 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 RNA5SP143-201ENST00000516936 115 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCN3P51790 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCN3P51790 MYL12AP1-201ENST00000518490 515 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 AC027309.2-201ENST00000520566 192 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCN3P51790 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.29□□□□□ -1.72
CLCN3P51790 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.29□□□□□ -1.72
CLCN3P51790 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCN3P51790 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.29□□□□□ -1.72
CLCN3P51790 GTF2IP8-201ENST00000560687 584 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCN3P51790 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCN3P51790 AC005344.1-201ENST00000613391 459 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 AC026368.1-201ENST00000614934 690 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 AL591424.2-201ENST00000617023 128 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCN3P51790 MKKS-204ENST00000639674 192 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCN3P51790 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCN3P51790 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CLCN3P51790 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 AP004289.2-201ENST00000444413 1457 ntBASIC4.29□□□□□ -1.72
CLCN3P51790 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCN3P51790 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.28□□□□□ -1.72
CLCN3P51790 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CLCN3P51790 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLCN3P51790 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCN3P51790 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCN3P51790 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLCN3P51790 LAP3P1-201ENST00000403648 294 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.28□□□□□ -1.72
CLCN3P51790 LUZP4P1-201ENST00000415420 344 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 NUP35P2-201ENST00000416748 943 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 HMGB1P37-201ENST00000439613 609 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 AC069285.2-201ENST00000440210 275 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 OR6K5P-201ENST00000447050 945 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCN3P51790 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCN3P51790 AC010307.1-201ENST00000467206 836 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCN3P51790 OR5H4P-201ENST00000510851 923 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 AC006499.6-201ENST00000511169 607 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 Y_RNA.688-201ENST00000516565 95 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms