Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.83□□□□□ -1.96
SRP9P49458 MIR7975-201ENST00000619350 68 ntBASIC2.83□□□□□ -1.96
SRP9P49458 AC244100.1-202ENST00000621554 382 ntBASIC2.83□□□□□ -1.96
SRP9P49458 AC127502.3-201ENST00000636170 1206 ntBASIC2.83□□□□□ -1.96
SRP9P49458 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SRP9P49458 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SRP9P49458 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.83□□□□□ -1.96
SRP9P49458 AF117829.1-206ENST00000621883 3802 ntBASIC2.82□□□□□ -1.96
SRP9P49458 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SRP9P49458 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SRP9P49458 RNA5SP171-201ENST00000391071 115 ntBASIC2.82□□□□□ -1.96
SRP9P49458 BX323014.1-201ENST00000412876 237 ntBASIC2.82□□□□□ -1.96
SRP9P49458 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SRP9P49458 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP9P49458 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.82□□□□□ -1.96
SRP9P49458 RPL21P110-201ENST00000433345 446 ntBASIC2.82□□□□□ -1.96
SRP9P49458 RPL17P49-201ENST00000443728 411 ntBASIC2.82□□□□□ -1.96
SRP9P49458 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP9P49458 ARL5AP2-201ENST00000444698 533 ntBASIC2.82□□□□□ -1.96
SRP9P49458 HMGB3P6-201ENST00000444896 598 ntBASIC2.82□□□□□ -1.96
SRP9P49458 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SRP9P49458 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP9P49458 NECAP1P2-201ENST00000455668 727 ntBASIC2.82□□□□□ -1.96
SRP9P49458 RPL21P18-201ENST00000469899 480 ntBASIC2.82□□□□□ -1.96
SRP9P49458 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.82□□□□□ -1.96
SRP9P49458 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SRP9P49458 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.82□□□□□ -1.96
SRP9P49458 SLC25A15P5-201ENST00000508033 253 ntBASIC2.82□□□□□ -1.96
SRP9P49458 KLHL2P1-201ENST00000508691 521 ntBASIC2.82□□□□□ -1.96
SRP9P49458 AC110792.2-201ENST00000510278 224 ntBASIC2.82□□□□□ -1.96
SRP9P49458 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.82□□□□□ -1.96
SRP9P49458 CCNG2P1-201ENST00000549521 1000 ntBASIC2.82□□□□□ -1.96
SRP9P49458 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP9P49458 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP9P49458 AL162713.1-201ENST00000604480 262 ntBASIC2.82□□□□□ -1.96
SRP9P49458 AC113194.1-201ENST00000606037 500 ntBASIC2.82□□□□□ -1.96
SRP9P49458 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC2.82□□□□□ -1.96
SRP9P49458 AL591516.1-201ENST00000611326 274 ntBASIC2.82□□□□□ -1.96
SRP9P49458 uc_338.1-201ENST00000612113 180 ntBASIC2.82□□□□□ -1.96
SRP9P49458 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SRP9P49458 AC073348.1-201ENST00000623002 331 ntBASIC2.82□□□□□ -1.96
SRP9P49458 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.82□□□□□ -1.96
SRP9P49458 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SRP9P49458 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SRP9P49458 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 MIR34B-201ENST00000385076 84 ntBASIC2.81□□□□□ -1.96
SRP9P49458 RN7SKP58-201ENST00000411010 305 ntBASIC2.81□□□□□ -1.96
SRP9P49458 RFESDP1-201ENST00000422350 461 ntBASIC2.81□□□□□ -1.96
SRP9P49458 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.81□□□□□ -1.96
SRP9P49458 AC244033.1-201ENST00000426826 870 ntBASIC2.81□□□□□ -1.96
SRP9P49458 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.81□□□□□ -1.96
SRP9P49458 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.81□□□□□ -1.96
SRP9P49458 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.81□□□□□ -1.96
SRP9P49458 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.81□□□□□ -1.96
SRP9P49458 RNU7-27P-201ENST00000459281 62 ntBASIC2.81□□□□□ -1.96
SRP9P49458 RN7SL601P-201ENST00000471221 293 ntBASIC2.81□□□□□ -1.96
SRP9P49458 RPL7P49-201ENST00000471402 708 ntBASIC2.81□□□□□ -1.96
SRP9P49458 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SRP9P49458 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SRP9P49458 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 SNORD59.2-201ENST00000516873 68 ntBASIC2.81□□□□□ -1.96
SRP9P49458 HIGD1AP1-201ENST00000550979 275 ntBASIC2.81□□□□□ -1.96
SRP9P49458 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.81□□□□□ -1.96
SRP9P49458 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.81□□□□□ -1.96
SRP9P49458 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.81□□□□□ -1.96
SRP9P49458 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 AC053481.3-201ENST00000577881 843 ntBASIC2.81□□□□□ -1.96
SRP9P49458 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP9P49458 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.81□□□□□ -1.96
SRP9P49458 HMGN2P28-201ENST00000606102 262 ntBASIC2.81□□□□□ -1.96
SRP9P49458 AL390240.1-201ENST00000612950 384 ntBASIC2.81□□□□□ -1.96
SRP9P49458 AL392048.1-201ENST00000613946 534 ntBASIC2.81□□□□□ -1.96
SRP9P49458 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.81□□□□□ -1.96
SRP9P49458 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.81□□□□□ -1.96
SRP9P49458 AP002907.1-201ENST00000606361 1430 ntBASIC2.81□□□□□ -1.96
SRP9P49458 AL353743.4-201ENST00000422653 1547 ntBASIC2.81□□□□□ -1.96
SRP9P49458 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SRP9P49458 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.81□□□□□ -1.96
SRP9P49458 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.8□□□□□ -1.96
SRP9P49458 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
SRP9P49458 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
SRP9P49458 AL353743.1-202ENST00000431724 1695 ntBASIC2.8□□□□□ -1.96
SRP9P49458 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SRP9P49458 RNU1-70P-201ENST00000362618 164 ntBASIC2.8□□□□□ -1.96
SRP9P49458 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SRP9P49458 HMGN1P24-201ENST00000412282 298 ntBASIC2.8□□□□□ -1.96
SRP9P49458 MTND4P11-201ENST00000417020 1058 ntBASIC2.8□□□□□ -1.96
SRP9P49458 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.8□□□□□ -1.96
SRP9P49458 OR2AS1P-201ENST00000427827 319 ntBASIC2.8□□□□□ -1.96
SRP9P49458 AC109583.1-201ENST00000432156 268 ntBASIC2.8□□□□□ -1.96
SRP9P49458 CKS1BP5-201ENST00000434172 273 ntBASIC2.8□□□□□ -1.96
SRP9P49458 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.8□□□□□ -1.96
SRP9P49458 AC006028.1-201ENST00000438379 402 ntBASIC2.8□□□□□ -1.96
SRP9P49458 AL606490.8-201ENST00000441624 319 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms