Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RNU6-406P-201ENST00000516470 107 ntBASIC5.78□□□□□ -1.48
GRIK1P39086 SNORA25.17-201ENST00000517184 124 ntBASIC5.78□□□□□ -1.48
GRIK1P39086 RN7SKP283-201ENST00000517197 270 ntBASIC5.78□□□□□ -1.48
GRIK1P39086 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.78□□□□□ -1.48
GRIK1P39086 SUB1P1-201ENST00000524415 382 ntBASIC5.78□□□□□ -1.48
GRIK1P39086 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.78□□□□□ -1.48
GRIK1P39086 AP000889.2-201ENST00000532684 490 ntBASIC5.78□□□□□ -1.48
GRIK1P39086 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GRIK1P39086 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.78□□□□□ -1.48
GRIK1P39086 AL049779.2-201ENST00000553847 315 ntBASIC5.78□□□□□ -1.48
GRIK1P39086 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GRIK1P39086 AP001180.3-201ENST00000582221 145 ntBASIC5.78□□□□□ -1.48
GRIK1P39086 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.78□□□□□ -1.48
GRIK1P39086 AC090510.2-201ENST00000617465 629 ntBASIC5.78□□□□□ -1.48
GRIK1P39086 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.78□□□□□ -1.48
GRIK1P39086 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.78□□□□□ -1.48
GRIK1P39086 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
GRIK1P39086 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.78□□□□□ -1.48
GRIK1P39086 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GRIK1P39086 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
GRIK1P39086 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
GRIK1P39086 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.78□□□□□ -1.48
GRIK1P39086 AC090337.1-201ENST00000579651 2074 ntBASIC5.78□□□□□ -1.48
GRIK1P39086 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GRIK1P39086 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.48
GRIK1P39086 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 AC235565.1-201ENST00000456962 1325 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
GRIK1P39086 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.77□□□□□ -1.49
GRIK1P39086 AC092079.1-201ENST00000558620 1985 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 RNU6-171P-201ENST00000384354 107 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 RNU6-456P-201ENST00000384493 107 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 AL583835.1-201ENST00000399570 407 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AL121834.1-202ENST00000404494 277 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AL133388.1-201ENST00000404509 287 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AC127391.1-201ENST00000411737 98 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 SRSF1P1-201ENST00000424058 520 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIK1P39086 GSTM5P1-201ENST00000434751 660 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIK1P39086 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIK1P39086 RPL26P28-201ENST00000451325 435 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AL645937.3-201ENST00000453647 936 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AC005229.2-201ENST00000456995 399 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIK1P39086 RNU7-152P-201ENST00000458982 64 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 MEMO1P3-201ENST00000459811 302 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 COPS8P2-201ENST00000473228 627 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 RN7SL799P-201ENST00000475891 298 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AC017015.1-201ENST00000477387 286 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AC068781.1-201ENST00000488231 618 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 RN7SL30P-201ENST00000488416 306 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 RPS17P5-201ENST00000498293 408 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AC024558.1-201ENST00000505008 528 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIK1P39086 POU5F1P7-201ENST00000508759 541 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.77□□□□□ -1.49
GRIK1P39086 RNU6-150P-201ENST00000516237 95 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 RNU6-1261P-201ENST00000517194 104 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 OR5D15P-201ENST00000531671 942 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.77□□□□□ -1.49
GRIK1P39086 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIK1P39086 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIK1P39086 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.77□□□□□ -1.49
GRIK1P39086 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
GRIK1P39086 AL512329.2-201ENST00000607350 548 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 AL133173.2-201ENST00000614270 90 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 AC025574.1-201ENST00000554784 1653 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
GRIK1P39086 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
GRIK1P39086 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.77□□□□□ -1.49
GRIK1P39086 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
GRIK1P39086 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GRIK1P39086 NUP58P1-201ENST00000502546 1738 ntBASIC5.77□□□□□ -1.49
GRIK1P39086 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIK1P39086 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 AC004158.1-201ENST00000564508 4319 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 MIR133B-201ENST00000362210 119 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 RNU6-582P-201ENST00000362989 107 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 Y_RNA.149-201ENST00000363558 117 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 U3.7-201ENST00000363668 216 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIK1P39086 SUGT1P1-201ENST00000379514 476 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 SNORD115.1-201ENST00000391109 76 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms