Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC6A4P31645 AC068722.2-201ENST00000618734 544 ntBASIC4.77□□□□□ -1.65
SLC6A4P31645 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC6A4P31645 AC021242.1-201ENST00000507315 2035 ntBASIC4.77□□□□□ -1.65
SLC6A4P31645 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SLC6A4P31645 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SLC6A4P31645 AC006378.2-201ENST00000623178 2476 ntBASIC4.77□□□□□ -1.65
SLC6A4P31645 AL592148.3-201ENST00000608771 2646 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 PHKBP1-201ENST00000450951 1951 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC6A4P31645 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC6A4P31645 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
SLC6A4P31645 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC6A4P31645 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC6A4P31645 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC6A4P31645 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SLC6A4P31645 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC6A4P31645 RNY4P24-201ENST00000362735 96 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AL080315.1-201ENST00000406055 466 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 UQCRBP1-201ENST00000421129 336 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.76□□□□□ -1.65
SLC6A4P31645 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC6A4P31645 DNAJC19P4-201ENST00000440115 345 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 TDGF1P1-201ENST00000445734 527 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC6A4P31645 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC6A4P31645 TRBV26-201ENST00000456572 344 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC004924.1-201ENST00000480160 781 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC6A4P31645 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC6A4P31645 HMGB3P16-201ENST00000508037 287 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC6A4P31645 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC6A4P31645 KCTD9P2-201ENST00000512203 1013 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC018797.3-201ENST00000513388 1241 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC108064.1-201ENST00000513791 460 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 RN7SKP244-201ENST00000516513 307 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC6A4P31645 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC6A4P31645 AC013828.2-201ENST00000532487 235 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC6A4P31645 MIR4715-201ENST00000584117 79 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 RN7SL435P-201ENST00000584418 282 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC6A4P31645 RPL12P25-202ENST00000598100 674 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC093765.1-201ENST00000603758 881 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SLC6A4P31645 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC6A4P31645 AC103710.4-201ENST00000609301 899 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC103710.1-201ENST00000610003 901 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 U6.42-201ENST00000618440 107 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AC073534.2-201ENST00000620377 381 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC6A4P31645 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC6A4P31645 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.76□□□□□ -1.65
SLC6A4P31645 DHX9P1-201ENST00000436565 3076 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 MTND5P26-201ENST00000426018 1752 ntBASIC4.76□□□□□ -1.65
SLC6A4P31645 AL391684.1-202ENST00000641293 1636 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC6A4P31645 STX3-208ENST00000641815 3236 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SLC6A4P31645 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AP000542.2-201ENST00000623199 6179 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AC126755.2-208ENST00000327792 462 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 OR4G2P-201ENST00000328113 903 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC138969.1-213ENST00000331436 462 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 RPL23AP57-201ENST00000332361 466 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 SNORA71.2-201ENST00000364941 134 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
SLC6A4P31645 MIR129-1-201ENST00000384972 72 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SLC6A4P31645 RNA5SP296-201ENST00000410523 111 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 RNU6-248P-201ENST00000410720 107 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 MTND1P23-201ENST00000416931 372 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC6A4P31645 OR2AH1P-201ENST00000425717 928 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AL356583.2-201ENST00000426536 280 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 RPL23AP74-201ENST00000437246 471 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC244505.5-201ENST00000443639 207 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC6A4P31645 EEF1A1P1-201ENST00000447052 739 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC6A4P31645 RNU7-136P-201ENST00000458819 69 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 snoU13.1-201ENST00000459157 104 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AC020890.1-201ENST00000491837 504 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC105252.1-201ENST00000503089 286 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC024589.1-201ENST00000512207 263 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC6A4P31645 RNU6-506P-201ENST00000516553 94 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 DEFB108A-201ENST00000530110 222 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC022878.1-201ENST00000530684 149 ntBASIC4.75□□□□□ -1.65
SLC6A4P31645 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC6A4P31645 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms