Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RPS3AP43-201ENST00000479743 781 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 OR5H3P-201ENST00000502817 919 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.73□□□□□ -1.97
COL8A2P25067 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.73□□□□□ -1.97
COL8A2P25067 RNU6-1004P-201ENST00000516584 111 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AC093014.1-201ENST00000548926 724 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 OR4U1P-201ENST00000554958 912 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 TGIF1P1-201ENST00000558095 802 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AC023158.1-201ENST00000561632 1025 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.73□□□□□ -1.97
COL8A2P25067 AC099778.2-201ENST00000610904 211 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL8A2P25067 AL157817.1-201ENST00000614264 790 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AC006213.5-201ENST00000619673 288 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AL356490.1-201ENST00000623079 479 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 AC018692.3-201ENST00000623929 123 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 CR392039.4-201ENST00000624968 501 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.73□□□□□ -1.97
COL8A2P25067 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.73□□□□□ -1.97
COL8A2P25067 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.73□□□□□ -1.97
COL8A2P25067 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.73□□□□□ -1.97
COL8A2P25067 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.73□□□□□ -1.97
COL8A2P25067 AC000367.1-201ENST00000452711 1766 ntBASIC2.73□□□□□ -1.97
COL8A2P25067 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.73□□□□□ -1.97
COL8A2P25067 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL8A2P25067 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL8A2P25067 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL8A2P25067 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
COL8A2P25067 AL118496.1-201ENST00000440201 1812 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL8A2P25067 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL8A2P25067 SEPT7P7-201ENST00000420492 1301 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.72□□□□□ -1.97
COL8A2P25067 RNU6-185P-201ENST00000384421 107 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 SNORA48.5-201ENST00000391143 135 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 UBE2V1P15-201ENST00000407776 448 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC007899.1-201ENST00000412776 775 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 RANP4-201ENST00000413361 655 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL8A2P25067 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.72□□□□□ -1.97
COL8A2P25067 AC012065.2-201ENST00000421295 375 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 RPL7P44-201ENST00000424827 742 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 RPL23AP82-202ENST00000427528 469 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.72□□□□□ -1.97
COL8A2P25067 MTND2P21-201ENST00000436242 1042 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.72□□□□□ -1.97
COL8A2P25067 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.72□□□□□ -1.97
COL8A2P25067 TXNP1-201ENST00000441872 371 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.72□□□□□ -1.97
COL8A2P25067 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.72□□□□□ -1.97
COL8A2P25067 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.72□□□□□ -1.97
COL8A2P25067 HMGB1P26-201ENST00000452520 628 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.72□□□□□ -1.97
COL8A2P25067 TVP23BP2-201ENST00000455082 615 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 CENPBD1P1-201ENST00000464061 469 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 TRBV8-2-201ENST00000475637 270 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC109925.1-201ENST00000478069 331 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 RPL7P23-201ENST00000493874 747 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.72□□□□□ -1.97
COL8A2P25067 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.72□□□□□ -1.97
COL8A2P25067 AC093770.1-201ENST00000511559 571 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC108120.2-201ENST00000512973 294 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 SETP12-201ENST00000514068 805 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.72□□□□□ -1.97
COL8A2P25067 AL161713.1-201ENST00000555538 145 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 MIR2682-201ENST00000580305 110 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC115085.1-201ENST00000588924 229 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 OR4H6P-202ENST00000603819 340 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC015849.2-201ENST00000605738 409 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC135803.1-201ENST00000608748 565 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.72□□□□□ -1.97
COL8A2P25067 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.72□□□□□ -1.97
COL8A2P25067 XIST_intron.1-201ENST00000619444 68 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 SNORD39.4-201ENST00000620099 78 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 AF127577.6-201ENST00000623352 2191 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 AC092326.2-201ENST00000624772 1561 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.72□□□□□ -1.97
COL8A2P25067 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL8A2P25067 AP001148.1-201ENST00000624124 2359 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.72□□□□□ -1.97
COL8A2P25067 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
COL8A2P25067 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
COL8A2P25067 AC007496.3-201ENST00000624987 3443 ntBASIC2.71□□□□□ -1.97
COL8A2P25067 ZNF542P-204ENST00000482727 1305 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL8A2P25067 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.71□□□□□ -1.98
COL8A2P25067 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL8A2P25067 GNG5P1-201ENST00000255500 204 ntBASIC2.71□□□□□ -1.98
COL8A2P25067 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms