Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC026368.1-201ENST00000614934 690 ntBASIC4.84□□□□□ -1.64
POLR2AP24928 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.84□□□□□ -1.64
POLR2AP24928 FRG1HP-204ENST00000617940 757 ntBASIC4.84□□□□□ -1.64
POLR2AP24928 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
POLR2AP24928 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.84□□□□□ -1.64
POLR2AP24928 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
POLR2AP24928 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.83□□□□□ -1.64
POLR2AP24928 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.83□□□□□ -1.64
POLR2AP24928 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
POLR2AP24928 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
POLR2AP24928 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
POLR2AP24928 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
POLR2AP24928 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 SNORA57.3-201ENST00000411095 141 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 HMGN1P14-201ENST00000412459 517 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 MTND1P21-201ENST00000412991 285 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 PDSS1P1-201ENST00000422953 1114 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 AL139421.1-201ENST00000423010 169 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 HSPE1P16-201ENST00000426640 348 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 OR6C5P-201ENST00000452388 923 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 PNPLA4P1-201ENST00000458328 305 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.83□□□□□ -1.64
POLR2AP24928 SMARCE1P4-201ENST00000523647 241 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 DEFB108A-201ENST00000530110 222 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
POLR2AP24928 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.83□□□□□ -1.64
POLR2AP24928 AC074029.1-201ENST00000552531 1044 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 AC092325.1-201ENST00000566449 554 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 ISCA1P3-201ENST00000577104 373 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.83□□□□□ -1.64
POLR2AP24928 AC011451.2-201ENST00000604303 598 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 AC008536.2-201ENST00000607284 349 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 AC098614.4-201ENST00000607601 462 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.83□□□□□ -1.64
POLR2AP24928 U6.105-201ENST00000637379 88 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
POLR2AP24928 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
POLR2AP24928 AP000473.2-201ENST00000602659 1537 ntBASIC4.83□□□□□ -1.64
POLR2AP24928 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 AL672167.1-205ENST00000641112 3080 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 Y_RNA.402-201ENST00000383972 102 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.82□□□□□ -1.64
POLR2AP24928 AC013404.1-201ENST00000413068 249 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 USP9YP6-201ENST00000413550 854 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.82□□□□□ -1.64
POLR2AP24928 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.82□□□□□ -1.64
POLR2AP24928 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.82□□□□□ -1.64
POLR2AP24928 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.82□□□□□ -1.64
POLR2AP24928 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 AC107016.1-201ENST00000550463 337 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.82□□□□□ -1.64
POLR2AP24928 AC037471.2-201ENST00000564941 598 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 TPRKBP2-201ENST00000565969 475 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 MIR5684-201ENST00000585074 65 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 MTCO2P22-201ENST00000603246 681 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC090578.1-201ENST00000604955 591 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 RNU6-88P-201ENST00000606801 100 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC004223.4-201ENST00000612426 332 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC004009.2-201ENST00000623016 728 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC091905.2-201ENST00000623143 306 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
POLR2AP24928 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.82□□□□□ -1.64
POLR2AP24928 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.82□□□□□ -1.64
POLR2AP24928 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.82□□□□□ -1.64
POLR2AP24928 MTCO1P54-201ENST00000430139 712 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.82□□□□□ -1.64
POLR2AP24928 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 VN1R10P-201ENST00000447106 875 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC115115.1-201ENST00000449927 248 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 CDH12P2-201ENST00000504393 298 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC006064.5-201ENST00000541782 248 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AL121579.1-201ENST00000555129 305 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 MIR4528-201ENST00000577763 90 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 AP005262.1-201ENST00000582646 997 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 AC015726.3-201ENST00000624501 418 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AC116618.1-201ENST00000634617 774 ntBASIC4.82□□□□□ -1.64
POLR2AP24928 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
POLR2AP24928 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
POLR2AP24928 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
POLR2AP24928 SEC63P2-201ENST00000503863 1939 ntBASIC4.81□□□□□ -1.64
POLR2AP24928 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
POLR2AP24928 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.81□□□□□ -1.64
POLR2AP24928 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms