Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.2□□□□□ -1.58
VAMP1P23763 AC005858.3-201ENST00000624756 589 ntBASIC5.2□□□□□ -1.58
VAMP1P23763 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.2□□□□□ -1.58
VAMP1P23763 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP1P23763 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP1P23763 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP1P23763 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VAMP1P23763 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VAMP1P23763 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP1P23763 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP1P23763 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.2□□□□□ -1.58
VAMP1P23763 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP1P23763 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VAMP1P23763 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP1P23763 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP1P23763 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.2□□□□□ -1.58
VAMP1P23763 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.2□□□□□ -1.58
VAMP1P23763 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.2□□□□□ -1.58
VAMP1P23763 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP1P23763 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
VAMP1P23763 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VAMP1P23763 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.19□□□□□ -1.58
VAMP1P23763 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 RNA5SP302-201ENST00000364896 100 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VAMP1P23763 UBE2V1P2-201ENST00000397758 440 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 HSPA8P15-201ENST00000401676 786 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 AL592114.1-201ENST00000403842 483 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 RNA5SP239-201ENST00000410218 129 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 CRYBB2P1-203ENST00000415709 538 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 BMS1P17-202ENST00000416720 316 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.19□□□□□ -1.58
VAMP1P23763 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.19□□□□□ -1.58
VAMP1P23763 AC073410.1-201ENST00000435125 589 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 AL663074.2-201ENST00000440621 479 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP1P23763 AC116533.1-201ENST00000459748 321 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 RPL7P19-201ENST00000469948 618 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
VAMP1P23763 RN7SL57P-201ENST00000493687 290 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.19□□□□□ -1.58
VAMP1P23763 RN7SL284P-201ENST00000498823 275 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP1P23763 HNRNPCP8-201ENST00000528764 888 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.19□□□□□ -1.58
VAMP1P23763 RPA2P3-201ENST00000533268 770 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP1P23763 AL049779.3-201ENST00000557141 606 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP1P23763 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP1P23763 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.19□□□□□ -1.58
VAMP1P23763 AC024614.1-201ENST00000577546 307 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 AC027229.1-201ENST00000583887 253 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.19□□□□□ -1.58
VAMP1P23763 NPIPB1P-202ENST00000588786 828 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP1P23763 AL357559.1-201ENST00000622228 274 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 AC090617.10-201ENST00000624308 134 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.19□□□□□ -1.58
VAMP1P23763 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 AL442639.1-201ENST00000625030 1899 ntBASIC5.19□□□□□ -1.58
VAMP1P23763 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VAMP1P23763 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.19□□□□□ -1.58
VAMP1P23763 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP1P23763 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP1P23763 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VAMP1P23763 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.18□□□□□ -1.58
VAMP1P23763 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
VAMP1P23763 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP1P23763 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
VAMP1P23763 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VAMP1P23763 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VAMP1P23763 AL139276.1-201ENST00000311910 1001 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 OR52B3P-201ENST00000314715 928 ntBASIC5.18□□□□□ -1.58
VAMP1P23763 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms