Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-1040P-201ENST00000383974 107 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 RNU4-70P-201ENST00000384579 139 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 RN7SKP17-201ENST00000411242 351 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.87□□□□□ -1.47
NFKB1P19838 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.87□□□□□ -1.47
NFKB1P19838 EIF5AP4-201ENST00000441206 465 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.87□□□□□ -1.47
NFKB1P19838 snoU13.8-201ENST00000458890 104 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 RPS27P27-201ENST00000498779 255 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.87□□□□□ -1.47
NFKB1P19838 AC139365.2-201ENST00000517972 253 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.87□□□□□ -1.47
NFKB1P19838 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 OR4P1P-201ENST00000530808 1136 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 AP000763.2-201ENST00000540641 163 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.87□□□□□ -1.47
NFKB1P19838 AC107958.1-201ENST00000556576 290 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.87□□□□□ -1.47
NFKB1P19838 FAM27E4-201ENST00000605259 342 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.87□□□□□ -1.47
NFKB1P19838 HMGB1P24-202ENST00000615653 685 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 MIR6071-201ENST00000616741 78 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 uc_338.11-201ENST00000619132 160 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 AC000123.2-201ENST00000623124 461 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 CR392039.4-201ENST00000624968 501 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NFKB1P19838 AC002525.1-201ENST00000624392 1622 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.87□□□□□ -1.47
NFKB1P19838 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
NFKB1P19838 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 AC123769.1-201ENST00000530992 3192 ntBASIC5.87□□□□□ -1.47
NFKB1P19838 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NFKB1P19838 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 RNA5SP258-201ENST00000362750 119 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 RNU6-1252P-201ENST00000363054 104 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 RN7SKP275-201ENST00000364626 301 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 RNU6-310P-201ENST00000384655 107 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 MIR137-201ENST00000385223 102 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 MIR130A-201ENST00000385274 89 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 RPL11P3-201ENST00000395256 523 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 RNU2-47P-201ENST00000410649 186 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 RPL36P19-201ENST00000430744 301 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 FTH1P1-201ENST00000437933 532 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 H2AFZP6-201ENST00000444403 394 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 RPL21P23-201ENST00000446654 460 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 MTND1P17-201ENST00000448961 204 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 SNRPFP3-201ENST00000457792 225 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC021382.1-201ENST00000483523 359 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 DUTP1-201ENST00000493631 470 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC005912.1-201ENST00000495392 255 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.86□□□□□ -1.47
NFKB1P19838 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.86□□□□□ -1.47
NFKB1P19838 AC104136.1-201ENST00000512969 394 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 SNORA25.10-201ENST00000515926 124 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.86□□□□□ -1.47
NFKB1P19838 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 HMGN2P36-201ENST00000529541 409 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AP000676.2-201ENST00000529711 301 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.86□□□□□ -1.47
NFKB1P19838 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.86□□□□□ -1.47
NFKB1P19838 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.86□□□□□ -1.47
NFKB1P19838 MIR4271-201ENST00000582451 67 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 AL109918.3-201ENST00000603072 338 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.86□□□□□ -1.47
NFKB1P19838 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NFKB1P19838 AL162373.1-201ENST00000620433 407 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC022400.9-201ENST00000623633 273 ntBASIC5.86□□□□□ -1.47
NFKB1P19838 AC092070.2-203ENST00000598377 3644 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms