Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AF001550.2-201ENST00000636643 217 ntBASIC4.29□□□□□ -1.72
RB1P06400 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RB1P06400 AC073346.2-201ENST00000624724 2058 ntBASIC4.29□□□□□ -1.72
RB1P06400 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RB1P06400 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RB1P06400 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RB1P06400 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RB1P06400 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RB1P06400 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
RB1P06400 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RB1P06400 MTCO1P14-201ENST00000441695 1559 ntBASIC4.28□□□□□ -1.72
RB1P06400 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.28□□□□□ -1.72
RB1P06400 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RB1P06400 RNA5SP72-201ENST00000364442 117 ntBASIC4.28□□□□□ -1.72
RB1P06400 MIR124-3-201ENST00000384866 87 ntBASIC4.28□□□□□ -1.72
RB1P06400 MIR153-1-201ENST00000384914 90 ntBASIC4.28□□□□□ -1.72
RB1P06400 HDGFP1-201ENST00000405943 252 ntBASIC4.28□□□□□ -1.72
RB1P06400 MTND4P22-201ENST00000413116 1169 ntBASIC4.28□□□□□ -1.72
RB1P06400 RPL31P2-201ENST00000413849 377 ntBASIC4.28□□□□□ -1.72
RB1P06400 AL161449.1-201ENST00000414531 1199 ntBASIC4.28□□□□□ -1.72
RB1P06400 RPS12P23-201ENST00000419579 400 ntBASIC4.28□□□□□ -1.72
RB1P06400 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.28□□□□□ -1.72
RB1P06400 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.28□□□□□ -1.72
RB1P06400 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.28□□□□□ -1.72
RB1P06400 OR51AB1P-201ENST00000429046 620 ntBASIC4.28□□□□□ -1.72
RB1P06400 SKP1P3-201ENST00000429280 487 ntBASIC4.28□□□□□ -1.72
RB1P06400 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.28□□□□□ -1.72
RB1P06400 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.28□□□□□ -1.72
RB1P06400 USP9YP31-201ENST00000431405 881 ntBASIC4.28□□□□□ -1.72
RB1P06400 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.28□□□□□ -1.72
RB1P06400 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.28□□□□□ -1.72
RB1P06400 RPL23AP76-201ENST00000441860 458 ntBASIC4.28□□□□□ -1.72
RB1P06400 AC012170.1-201ENST00000495139 359 ntBASIC4.28□□□□□ -1.72
RB1P06400 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.28□□□□□ -1.72
RB1P06400 AC108145.1-201ENST00000503770 153 ntBASIC4.28□□□□□ -1.72
RB1P06400 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.28□□□□□ -1.72
RB1P06400 AC110768.1-201ENST00000509222 400 ntBASIC4.28□□□□□ -1.72
RB1P06400 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.28□□□□□ -1.72
RB1P06400 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.28□□□□□ -1.72
RB1P06400 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.28□□□□□ -1.72
RB1P06400 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.28□□□□□ -1.72
RB1P06400 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.28□□□□□ -1.72
RB1P06400 SULT1C2P1-202ENST00000562418 459 ntBASIC4.28□□□□□ -1.72
RB1P06400 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.28□□□□□ -1.72
RB1P06400 YWHAQP7-201ENST00000603536 658 ntBASIC4.28□□□□□ -1.72
RB1P06400 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.28□□□□□ -1.72
RB1P06400 AC022509.4-201ENST00000621404 572 ntBASIC4.28□□□□□ -1.72
RB1P06400 AC006963.1-201ENST00000624003 1052 ntBASIC4.28□□□□□ -1.72
RB1P06400 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.28□□□□□ -1.72
RB1P06400 MKKS-204ENST00000639674 192 ntBASIC4.28□□□□□ -1.72
RB1P06400 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RB1P06400 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RB1P06400 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RB1P06400 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RB1P06400 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
RB1P06400 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RB1P06400 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RB1P06400 AC109315.1-201ENST00000584143 1347 ntBASIC4.27□□□□□ -1.73
RB1P06400 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.27□□□□□ -1.73
RB1P06400 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RB1P06400 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RB1P06400 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RB1P06400 RNU1-108P-201ENST00000362556 161 ntBASIC4.27□□□□□ -1.73
RB1P06400 RNU5D-1-201ENST00000363299 116 ntBASIC4.27□□□□□ -1.73
RB1P06400 MIR491-201ENST00000384877 84 ntBASIC4.27□□□□□ -1.73
RB1P06400 PTMAP5-201ENST00000393073 333 ntBASIC4.27□□□□□ -1.73
RB1P06400 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RB1P06400 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RB1P06400 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.27□□□□□ -1.73
RB1P06400 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RB1P06400 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.27□□□□□ -1.73
RB1P06400 PSMA2P3-201ENST00000429685 675 ntBASIC4.27□□□□□ -1.73
RB1P06400 RPL31P54-201ENST00000429803 370 ntBASIC4.27□□□□□ -1.73
RB1P06400 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.27□□□□□ -1.73
RB1P06400 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.27□□□□□ -1.73
RB1P06400 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.27□□□□□ -1.73
RB1P06400 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.27□□□□□ -1.73
RB1P06400 RPL21P103-201ENST00000479921 488 ntBASIC4.27□□□□□ -1.73
RB1P06400 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.27□□□□□ -1.73
RB1P06400 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.27□□□□□ -1.73
RB1P06400 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.27□□□□□ -1.73
RB1P06400 RNU6-1225P-201ENST00000516336 65 ntBASIC4.27□□□□□ -1.73
RB1P06400 RNA5SP179-201ENST00000517284 121 ntBASIC4.27□□□□□ -1.73
RB1P06400 AC008694.2-201ENST00000517591 306 ntBASIC4.27□□□□□ -1.73
RB1P06400 NDUFA5P2-201ENST00000519723 344 ntBASIC4.27□□□□□ -1.73
RB1P06400 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RB1P06400 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.27□□□□□ -1.73
RB1P06400 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.27□□□□□ -1.73
RB1P06400 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.27□□□□□ -1.73
RB1P06400 AC138915.2-201ENST00000569776 97 ntBASIC4.27□□□□□ -1.73
RB1P06400 AC012417.1-201ENST00000582307 1039 ntBASIC4.27□□□□□ -1.73
RB1P06400 AC007566.2-201ENST00000603642 413 ntBASIC4.27□□□□□ -1.73
RB1P06400 AC114878.2-201ENST00000604863 1251 ntBASIC4.27□□□□□ -1.73
RB1P06400 AL160281.1-201ENST00000605307 311 ntBASIC4.27□□□□□ -1.73
RB1P06400 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.27□□□□□ -1.73
RB1P06400 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.27□□□□□ -1.73
RB1P06400 AL159169.3-201ENST00000608871 561 ntBASIC4.27□□□□□ -1.73
RB1P06400 AC092954.1-201ENST00000609121 445 ntBASIC4.27□□□□□ -1.73
RB1P06400 AC006386.1-201ENST00000619436 415 ntBASIC4.27□□□□□ -1.73
RB1P06400 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms