Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OR5H5P-201ENST00000503164 928 ntBASIC1.7□□□□□ -2.14
APOBP04114 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
APOBP04114 AC009063.1-201ENST00000563342 702 ntBASIC1.7□□□□□ -2.14
APOBP04114 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.7□□□□□ -2.14
APOBP04114 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 MIR30E-201ENST00000362104 92 ntBASIC1.69□□□□□ -2.14
APOBP04114 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.69□□□□□ -2.14
APOBP04114 AC245054.2-201ENST00000415639 319 ntBASIC1.69□□□□□ -2.14
APOBP04114 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.69□□□□□ -2.14
APOBP04114 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC1.69□□□□□ -2.14
APOBP04114 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.69□□□□□ -2.14
APOBP04114 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
APOBP04114 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 MIR423-201ENST00000362201 94 ntBASIC1.69□□□□□ -2.14
APOBP04114 MIR27B-201ENST00000385129 97 ntBASIC1.69□□□□□ -2.14
APOBP04114 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.69□□□□□ -2.14
APOBP04114 RPS12P23-201ENST00000419579 400 ntBASIC1.69□□□□□ -2.14
APOBP04114 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.69□□□□□ -2.14
APOBP04114 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.69□□□□□ -2.14
APOBP04114 RN7SKP31-201ENST00000516354 278 ntBASIC1.69□□□□□ -2.14
APOBP04114 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.69□□□□□ -2.14
APOBP04114 MIR5047-201ENST00000579212 100 ntBASIC1.69□□□□□ -2.14
APOBP04114 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 RNU6-55P-201ENST00000411092 107 ntBASIC1.69□□□□□ -2.14
APOBP04114 RNU6-954P-201ENST00000411355 107 ntBASIC1.69□□□□□ -2.14
APOBP04114 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.69□□□□□ -2.14
APOBP04114 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC1.69□□□□□ -2.14
APOBP04114 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC1.69□□□□□ -2.14
APOBP04114 RPL36AP21-201ENST00000490372 323 ntBASIC1.69□□□□□ -2.14
APOBP04114 RNA5SP320-201ENST00000516263 124 ntBASIC1.69□□□□□ -2.14
APOBP04114 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC1.69□□□□□ -2.14
APOBP04114 AC009101.1-201ENST00000568135 242 ntBASIC1.69□□□□□ -2.14
APOBP04114 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.69□□□□□ -2.14
APOBP04114 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC1.69□□□□□ -2.14
APOBP04114 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 CACYBPP2-201ENST00000453625 678 ntBASIC1.69□□□□□ -2.14
APOBP04114 RPL21P99-201ENST00000480369 423 ntBASIC1.69□□□□□ -2.14
APOBP04114 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 AP000867.2-201ENST00000532468 320 ntBASIC1.69□□□□□ -2.14
APOBP04114 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.69□□□□□ -2.14
APOBP04114 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APOBP04114 SPATA2P1-201ENST00000431223 2055 ntBASIC1.69□□□□□ -2.14
APOBP04114 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
APOBP04114 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
APOBP04114 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
APOBP04114 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC1.68□□□□□ -2.14
APOBP04114 RPS20P5-201ENST00000434808 360 ntBASIC1.68□□□□□ -2.14
APOBP04114 AC118282.1-201ENST00000506408 765 ntBASIC1.68□□□□□ -2.14
APOBP04114 AC119751.1-201ENST00000513357 765 ntBASIC1.68□□□□□ -2.14
APOBP04114 OR5AK3P-201ENST00000527486 1297 ntBASIC1.68□□□□□ -2.14
APOBP04114 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.68□□□□□ -2.14
APOBP04114 AC078899.5-201ENST00000612475 178 ntBASIC1.68□□□□□ -2.14
APOBP04114 AL356490.1-201ENST00000623079 479 ntBASIC1.68□□□□□ -2.14
APOBP04114 AL512643.1-201ENST00000635735 524 ntBASIC1.68□□□□□ -2.14
APOBP04114 AC006020.1-201ENST00000420179 1854 ntBASIC1.68□□□□□ -2.14
APOBP04114 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC1.68□□□□□ -2.14
APOBP04114 AC011242.1-201ENST00000433596 1158 ntBASIC1.68□□□□□ -2.14
APOBP04114 HMGB1P48-201ENST00000446155 598 ntBASIC1.68□□□□□ -2.14
APOBP04114 RPL9P6-201ENST00000492764 598 ntBASIC1.68□□□□□ -2.14
APOBP04114 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.68□□□□□ -2.14
APOBP04114 SCGB1D5P-201ENST00000515134 247 ntBASIC1.68□□□□□ -2.14
APOBP04114 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.68□□□□□ -2.14
APOBP04114 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.68□□□□□ -2.14
APOBP04114 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC1.68□□□□□ -2.14
APOBP04114 AC107081.3-201ENST00000612715 2034 ntBASIC1.68□□□□□ -2.14
APOBP04114 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC1.68□□□□□ -2.14
APOBP04114 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
APOBP04114 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
APOBP04114 OR2AS1P-201ENST00000427827 319 ntBASIC1.68□□□□□ -2.14
APOBP04114 AL592045.1-201ENST00000429867 352 ntBASIC1.68□□□□□ -2.14
APOBP04114 AL591623.2-201ENST00000449978 222 ntBASIC1.68□□□□□ -2.14
APOBP04114 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.68□□□□□ -2.14
APOBP04114 RNA5SP217-201ENST00000515959 91 ntBASIC1.68□□□□□ -2.14
APOBP04114 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.68□□□□□ -2.14
APOBP04114 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.68□□□□□ -2.14
APOBP04114 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
APOBP04114 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
APOBP04114 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
APOBP04114 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
APOBP04114 MIR181A2-201ENST00000384863 110 ntBASIC1.67□□□□□ -2.14
APOBP04114 OR6C64P-201ENST00000419708 825 ntBASIC1.67□□□□□ -2.14
APOBP04114 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.67□□□□□ -2.14
APOBP04114 AC008716.1-201ENST00000511084 513 ntBASIC1.67□□□□□ -2.14
APOBP04114 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.67□□□□□ -2.14
APOBP04114 Z82195.1-201ENST00000604558 398 ntBASIC1.67□□□□□ -2.14
APOBP04114 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
APOBP04114 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC1.67□□□□□ -2.14
APOBP04114 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
APOBP04114 OR4G2P-202ENST00000641004 1759 ntBASIC1.67□□□□□ -2.14
APOBP04114 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC1.67□□□□□ -2.14
APOBP04114 BX679664.1-201ENST00000434429 253 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms