Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NMD3P1-201ENST00000439704 1488 ntBASIC3.83□□□□□ -1.8
CHRNA1P02708 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CHRNA1P02708 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA1P02708 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA1P02708 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA1P02708 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA1P02708 OTUD4P1-201ENST00000237841 3067 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.82□□□□□ -1.8
CHRNA1P02708 HSPA8P1-201ENST00000425843 1833 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA1P02708 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA1P02708 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AL512646.1-201ENST00000269395 1077 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 SNORA38.1-201ENST00000364172 131 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 RNU6-609P-201ENST00000365459 107 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA1P02708 DNAJC19P6-201ENST00000401853 280 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 PRRC2CP1-201ENST00000404428 159 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 SNORA11C-201ENST00000408532 129 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 RHEBP3-201ENST00000411920 351 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.82□□□□□ -1.8
CHRNA1P02708 IFNNP1-201ENST00000429219 553 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AC233982.1-201ENST00000451247 436 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 MRPL35P4-201ENST00000453682 566 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AC078857.1-201ENST00000469870 667 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 RPL21P47-201ENST00000483696 477 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AC008628.1-201ENST00000508663 265 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.82□□□□□ -1.8
CHRNA1P02708 GMPSP1-201ENST00000514075 579 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA1P02708 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA1P02708 AP003717.3-201ENST00000544832 1180 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AC093510.2-201ENST00000562820 896 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 ZNF192P1-203ENST00000565888 810 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AC095057.3-201ENST00000567102 1157 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA1P02708 AC006213.5-201ENST00000619673 288 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AC006065.5-201ENST00000623427 349 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 AL356274.2-201ENST00000624379 3752 ntBASIC3.82□□□□□ -1.8
CHRNA1P02708 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 MFSD8-213ENST00000641134 1327 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHRNA1P02708 MIR128-1-201ENST00000384921 82 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 U3.39-201ENST00000408569 239 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 AC007390.1-201ENST00000415722 356 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 AL158050.1-201ENST00000416077 457 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA1P02708 AL365396.1-201ENST00000430854 671 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA1P02708 AC009263.1-201ENST00000441193 1239 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA1P02708 RN7SL93P-201ENST00000463035 293 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA1P02708 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA1P02708 AC005921.1-201ENST00000510589 286 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 AC005798.1-201ENST00000513715 387 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 RN7SKP234-201ENST00000517173 224 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 MTND2P7-201ENST00000521337 640 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA1P02708 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CHRNA1P02708 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA1P02708 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA1P02708 AL136520.1-202ENST00000555494 763 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 AC012493.2-201ENST00000595083 291 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 AC091488.1-201ENST00000604239 660 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.81□□□□□ -1.8
CHRNA1P02708 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA1P02708 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA1P02708 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CHRNA1P02708 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA1P02708 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHRNA1P02708 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.8□□□□□ -1.8
CHRNA1P02708 MAPK10-373ENST00000641983 6772 ntBASIC3.8□□□□□ -1.8
CHRNA1P02708 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.8□□□□□ -1.8
CHRNA1P02708 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CHRNA1P02708 AL512283.1-201ENST00000606756 1384 ntBASIC3.8□□□□□ -1.8
CHRNA1P02708 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHRNA1P02708 RNU1-18P-201ENST00000363062 164 ntBASIC3.8□□□□□ -1.8
CHRNA1P02708 RNA5SP42-201ENST00000364278 115 ntBASIC3.8□□□□□ -1.8
CHRNA1P02708 RNA5SP189-201ENST00000364920 115 ntBASIC3.8□□□□□ -1.8
CHRNA1P02708 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHRNA1P02708 RNU6-356P-201ENST00000384140 107 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms