Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
APOEP02649 AC004972.1-201ENST00000623934 2209 ntBASIC3.34□□□□□ -1.87
APOEP02649 Y_RNA.333-201ENST00000365274 102 ntBASIC3.34□□□□□ -1.87
APOEP02649 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.34□□□□□ -1.87
APOEP02649 SDCBPP3-201ENST00000419629 891 ntBASIC3.34□□□□□ -1.87
APOEP02649 AC006960.1-201ENST00000419980 153 ntBASIC3.34□□□□□ -1.87
APOEP02649 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.34□□□□□ -1.87
APOEP02649 MTCO1P43-201ENST00000431831 488 ntBASIC3.34□□□□□ -1.87
APOEP02649 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.34□□□□□ -1.87
APOEP02649 ARL5AP2-201ENST00000444698 533 ntBASIC3.34□□□□□ -1.87
APOEP02649 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
APOEP02649 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.34□□□□□ -1.87
APOEP02649 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.34□□□□□ -1.87
APOEP02649 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.34□□□□□ -1.87
APOEP02649 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.34□□□□□ -1.87
APOEP02649 AC104629.2-201ENST00000468627 598 ntBASIC3.34□□□□□ -1.87
APOEP02649 RN7SL283P-201ENST00000489055 303 ntBASIC3.34□□□□□ -1.87
APOEP02649 OR5H3P-201ENST00000502817 919 ntBASIC3.34□□□□□ -1.87
APOEP02649 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.34□□□□□ -1.87
APOEP02649 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.34□□□□□ -1.87
APOEP02649 MTND4LP22-201ENST00000508209 276 ntBASIC3.34□□□□□ -1.87
APOEP02649 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.34□□□□□ -1.87
APOEP02649 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.34□□□□□ -1.87
APOEP02649 AC068657.1-201ENST00000520807 306 ntBASIC3.34□□□□□ -1.87
APOEP02649 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
APOEP02649 RPL21P12-201ENST00000559810 515 ntBASIC3.34□□□□□ -1.87
APOEP02649 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.34□□□□□ -1.87
APOEP02649 AC115989.2-201ENST00000578640 563 ntBASIC3.34□□□□□ -1.87
APOEP02649 MIR5195-201ENST00000583555 115 ntBASIC3.34□□□□□ -1.87
APOEP02649 MAGOH2P-202ENST00000584384 429 ntBASIC3.34□□□□□ -1.87
APOEP02649 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.34□□□□□ -1.87
APOEP02649 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.34□□□□□ -1.87
APOEP02649 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.34□□□□□ -1.87
APOEP02649 AC004832.5-201ENST00000608677 401 ntBASIC3.34□□□□□ -1.87
APOEP02649 AL590410.1-201ENST00000617925 333 ntBASIC3.34□□□□□ -1.87
APOEP02649 AC019080.5-201ENST00000624891 757 ntBASIC3.34□□□□□ -1.87
APOEP02649 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOEP02649 ELL2P4-201ENST00000446870 1376 ntBASIC3.34□□□□□ -1.88
APOEP02649 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOEP02649 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOEP02649 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOEP02649 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOEP02649 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.33□□□□□ -1.88
APOEP02649 XKRYP4-201ENST00000414395 483 ntBASIC3.33□□□□□ -1.88
APOEP02649 HMGB3P23-201ENST00000414981 585 ntBASIC3.33□□□□□ -1.88
APOEP02649 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.33□□□□□ -1.88
APOEP02649 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.33□□□□□ -1.88
APOEP02649 RPS3AP12-201ENST00000443616 753 ntBASIC3.33□□□□□ -1.88
APOEP02649 XKRYP5-201ENST00000449659 483 ntBASIC3.33□□□□□ -1.88
APOEP02649 AC115115.1-201ENST00000449927 248 ntBASIC3.33□□□□□ -1.88
APOEP02649 RN7SL863P-201ENST00000462370 296 ntBASIC3.33□□□□□ -1.88
APOEP02649 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.33□□□□□ -1.88
APOEP02649 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.33□□□□□ -1.88
APOEP02649 AC090071.1-201ENST00000507713 644 ntBASIC3.33□□□□□ -1.88
APOEP02649 ACTR6P1-201ENST00000514311 1104 ntBASIC3.33□□□□□ -1.88
APOEP02649 AL163153.1-201ENST00000554223 283 ntBASIC3.33□□□□□ -1.88
APOEP02649 MIR2682-201ENST00000580305 110 ntBASIC3.33□□□□□ -1.88
APOEP02649 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.33□□□□□ -1.88
APOEP02649 AC091488.1-201ENST00000604239 660 ntBASIC3.33□□□□□ -1.88
APOEP02649 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.33□□□□□ -1.88
APOEP02649 uc_338.25-201ENST00000613756 156 ntBASIC3.33□□□□□ -1.88
APOEP02649 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.33□□□□□ -1.88
APOEP02649 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOEP02649 AL355578.1-201ENST00000607405 1328 ntBASIC3.33□□□□□ -1.88
APOEP02649 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
APOEP02649 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOEP02649 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
APOEP02649 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
APOEP02649 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.32□□□□□ -1.88
APOEP02649 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.32□□□□□ -1.88
APOEP02649 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOEP02649 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.32□□□□□ -1.88
APOEP02649 BTF3P9-201ENST00000418784 283 ntBASIC3.32□□□□□ -1.88
APOEP02649 UBE2V1P1-201ENST00000430836 445 ntBASIC3.32□□□□□ -1.88
APOEP02649 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.32□□□□□ -1.88
APOEP02649 HSPE1P28-201ENST00000443139 211 ntBASIC3.32□□□□□ -1.88
APOEP02649 RPS27P5-201ENST00000444247 244 ntBASIC3.32□□□□□ -1.88
APOEP02649 RPL7P59-201ENST00000447700 943 ntBASIC3.32□□□□□ -1.88
APOEP02649 ELOCP23-201ENST00000452014 332 ntBASIC3.32□□□□□ -1.88
APOEP02649 ARPC3P2-201ENST00000457786 533 ntBASIC3.32□□□□□ -1.88
APOEP02649 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.32□□□□□ -1.88
APOEP02649 AC078918.1-201ENST00000498515 228 ntBASIC3.32□□□□□ -1.88
APOEP02649 KCTD9P5-201ENST00000504141 1170 ntBASIC3.32□□□□□ -1.88
APOEP02649 RNA5SP217-201ENST00000515959 91 ntBASIC3.32□□□□□ -1.88
APOEP02649 RN7SKP234-201ENST00000517173 224 ntBASIC3.32□□□□□ -1.88
APOEP02649 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.32□□□□□ -1.88
APOEP02649 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.32□□□□□ -1.88
APOEP02649 AC015849.2-201ENST00000605738 409 ntBASIC3.32□□□□□ -1.88
APOEP02649 AC138932.5-201ENST00000617759 563 ntBASIC3.32□□□□□ -1.88
APOEP02649 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.32□□□□□ -1.88
APOEP02649 AC091903.1-201ENST00000624322 454 ntBASIC3.32□□□□□ -1.88
APOEP02649 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.32□□□□□ -1.88
APOEP02649 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
APOEP02649 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
APOEP02649 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOEP02649 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
APOEP02649 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.31□□□□□ -1.88
APOEP02649 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOEP02649 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOEP02649 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms