Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC1.26□□□□□ -2.21
USH2AO75445 DNAJC19P1-201ENST00000455312 319 ntBASIC1.26□□□□□ -2.21
USH2AO75445 RPL5P13-201ENST00000462840 709 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC091917.2-201ENST00000505002 744 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC017037.1-201ENST00000508460 471 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC1.26□□□□□ -2.21
USH2AO75445 AL353600.1-201ENST00000608148 251 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC009318.2-201ENST00000610917 651 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 RALGAPA1P1-201ENST00000443361 6232 ntBASIC1.26□□□□□ -2.21
USH2AO75445 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
USH2AO75445 AL359643.1-201ENST00000404109 423 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.26□□□□□ -2.21
USH2AO75445 EIF4EP1-201ENST00000422311 642 ntBASIC1.26□□□□□ -2.21
USH2AO75445 CST9LP2-201ENST00000437612 320 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC021205.2-201ENST00000480069 347 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC1.26□□□□□ -2.21
USH2AO75445 AC005921.1-201ENST00000510589 286 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.26□□□□□ -2.21
USH2AO75445 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.26□□□□□ -2.21
USH2AO75445 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.26□□□□□ -2.21
USH2AO75445 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
USH2AO75445 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC1.26□□□□□ -2.21
USH2AO75445 RNU6-859P-201ENST00000362728 107 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC092013.1-201ENST00000438795 332 ntBASIC1.26□□□□□ -2.21
USH2AO75445 Z99127.2-201ENST00000441426 334 ntBASIC1.26□□□□□ -2.21
USH2AO75445 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.26□□□□□ -2.21
USH2AO75445 TRBV8-2-201ENST00000475637 270 ntBASIC1.26□□□□□ -2.21
USH2AO75445 ARL4AP1-201ENST00000503220 705 ntBASIC1.26□□□□□ -2.21
USH2AO75445 FAM92A1P2-202ENST00000504766 877 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC107934.2-201ENST00000518653 310 ntBASIC1.26□□□□□ -2.21
USH2AO75445 RANP3-201ENST00000530970 276 ntBASIC1.26□□□□□ -2.21
USH2AO75445 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
USH2AO75445 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.26□□□□□ -2.21
USH2AO75445 AC008083.2-201ENST00000546707 476 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
USH2AO75445 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
USH2AO75445 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 MIR592-201ENST00000384959 97 ntBASIC1.26□□□□□ -2.21
USH2AO75445 HSPE1P8-201ENST00000406997 288 ntBASIC1.26□□□□□ -2.21
USH2AO75445 USP9YP6-201ENST00000413550 854 ntBASIC1.26□□□□□ -2.21
USH2AO75445 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 DPH3P2-201ENST00000422618 250 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 RPS26P30-201ENST00000443431 335 ntBASIC1.26□□□□□ -2.21
USH2AO75445 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 USP9YP34-201ENST00000453983 808 ntBASIC1.26□□□□□ -2.21
USH2AO75445 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 AC090602.1-201ENST00000469695 252 ntBASIC1.26□□□□□ -2.21
USH2AO75445 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC1.26□□□□□ -2.21
USH2AO75445 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AC009063.1-201ENST00000563342 702 ntBASIC1.26□□□□□ -2.21
USH2AO75445 CYP2C60P-201ENST00000566088 139 ntBASIC1.26□□□□□ -2.21
USH2AO75445 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.26□□□□□ -2.21
USH2AO75445 LINC00216-201ENST00000623548 1126 ntBASIC1.26□□□□□ -2.21
USH2AO75445 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
USH2AO75445 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USH2AO75445 AC026241.1-201ENST00000517873 2142 ntBASIC1.26□□□□□ -2.21
USH2AO75445 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 IFNNP1-201ENST00000429219 553 ntBASIC1.25□□□□□ -2.21
USH2AO75445 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.25□□□□□ -2.21
USH2AO75445 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 AC021146.8-201ENST00000507455 733 ntBASIC1.25□□□□□ -2.21
USH2AO75445 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC1.25□□□□□ -2.21
USH2AO75445 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 AC243972.3-201ENST00000539655 198 ntBASIC1.25□□□□□ -2.21
USH2AO75445 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 OR4T1P-201ENST00000554933 911 ntBASIC1.25□□□□□ -2.21
USH2AO75445 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.25□□□□□ -2.21
USH2AO75445 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC1.25□□□□□ -2.21
USH2AO75445 MIR1276-201ENST00000408707 83 ntBASIC1.25□□□□□ -2.21
USH2AO75445 RPL21P109-201ENST00000422213 475 ntBASIC1.25□□□□□ -2.21
USH2AO75445 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 ELOCP13-201ENST00000443934 329 ntBASIC1.25□□□□□ -2.21
USH2AO75445 NIPA2P5-201ENST00000452282 464 ntBASIC1.25□□□□□ -2.21
USH2AO75445 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 AC005840.1-201ENST00000498412 377 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms