Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL162574.2-201ENST00000614618 657 ntBASIC2.31□□□□□ -2.04
SSSCA1O60232 AC006111.3-201ENST00000622137 383 ntBASIC2.31□□□□□ -2.04
SSSCA1O60232 CR392039.5-201ENST00000623201 510 ntBASIC2.31□□□□□ -2.04
SSSCA1O60232 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSSCA1O60232 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SSSCA1O60232 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSSCA1O60232 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SSSCA1O60232 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
SSSCA1O60232 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SSSCA1O60232 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SSSCA1O60232 AC004925.1-201ENST00000624256 2706 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSSCA1O60232 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SSSCA1O60232 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SSSCA1O60232 MIR592-201ENST00000384959 97 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 RPL21P75-201ENST00000396599 483 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 RPL21P28-201ENST00000401418 483 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AL592114.1-201ENST00000403842 483 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.3□□□□□ -2.04
SSSCA1O60232 TRGV6-201ENST00000417928 299 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.3□□□□□ -2.04
SSSCA1O60232 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.3□□□□□ -2.04
SSSCA1O60232 AC018644.1-201ENST00000429934 551 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AL606490.7-201ENST00000433136 191 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 RPL23AP74-201ENST00000437246 471 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.3□□□□□ -2.04
SSSCA1O60232 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 Z75741.1-201ENST00000446793 314 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AL133547.1-201ENST00000448546 220 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 CYCSP35-201ENST00000451978 304 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.3□□□□□ -2.04
SSSCA1O60232 RPL21P39-201ENST00000463605 483 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SSSCA1O60232 AC011979.1-201ENST00000472300 483 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SSSCA1O60232 RPL21P93-201ENST00000480465 489 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC233702.1-201ENST00000482905 502 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC087190.1-201ENST00000484462 480 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 NCOR1P1-202ENST00000486162 291 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC068724.1-201ENST00000487100 792 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC093591.1-201ENST00000491435 481 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.3□□□□□ -2.04
SSSCA1O60232 RPL21P129-201ENST00000491732 478 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 RPL21P16-201ENST00000495531 483 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC098799.2-201ENST00000509466 868 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.3□□□□□ -2.04
SSSCA1O60232 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSSCA1O60232 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SSSCA1O60232 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.3□□□□□ -2.04
SSSCA1O60232 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.3□□□□□ -2.04
SSSCA1O60232 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.3□□□□□ -2.04
SSSCA1O60232 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 SETP2-201ENST00000553886 926 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.3□□□□□ -2.04
SSSCA1O60232 MIR3160-1-201ENST00000577972 85 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.3□□□□□ -2.04
SSSCA1O60232 NF1P5-201ENST00000588287 448 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC034236.3-201ENST00000605999 461 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 AC112503.1-201ENST00000608436 391 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.3□□□□□ -2.04
SSSCA1O60232 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.3□□□□□ -2.04
SSSCA1O60232 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.3□□□□□ -2.04
SSSCA1O60232 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSSCA1O60232 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.3□□□□□ -2.04
SSSCA1O60232 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
SSSCA1O60232 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SSSCA1O60232 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.29□□□□□ -2.04
SSSCA1O60232 OR5BR1P-201ENST00000524992 1330 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC2.29□□□□□ -2.04
SSSCA1O60232 RNU4-47P-201ENST00000410876 114 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.29□□□□□ -2.04
SSSCA1O60232 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.29□□□□□ -2.04
SSSCA1O60232 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SSSCA1O60232 AC091286.1-201ENST00000431233 461 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 KCTD10P1-201ENST00000434203 625 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 AC006028.1-201ENST00000438379 402 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.29□□□□□ -2.04
SSSCA1O60232 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.29□□□□□ -2.04
SSSCA1O60232 AC034236.1-201ENST00000469891 373 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 VN1R17P-201ENST00000472048 1090 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.29□□□□□ -2.04
SSSCA1O60232 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC2.29□□□□□ -2.04
SSSCA1O60232 MTATP6P22-201ENST00000507369 598 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 PTGES3P3-201ENST00000511479 482 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 RNU1-45P-201ENST00000517191 141 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.29□□□□□ -2.04
SSSCA1O60232 VN1R81P-201ENST00000602085 372 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.29□□□□□ -2.04
SSSCA1O60232 AC096586.2-201ENST00000610260 441 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 AC145207.9-201ENST00000623802 325 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SSSCA1O60232 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SSSCA1O60232 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SSSCA1O60232 FAM35BP-202ENST00000497389 3337 ntBASIC2.29□□□□□ -2.04
SSSCA1O60232 Z82195.2-201ENST00000612348 18351 ntBASIC2.28□□□□□ -2.04
SSSCA1O60232 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
SSSCA1O60232 AC092593.1-201ENST00000515413 1815 ntBASIC2.28□□□□□ -2.04
SSSCA1O60232 AC009501.3-201ENST00000605001 1352 ntBASIC2.28□□□□□ -2.04
SSSCA1O60232 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SSSCA1O60232 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms