Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL136164.4-201ENST00000625013 2135 ntBASIC3.41□□□□□ -1.86
LSM1O15116 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM1O15116 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
LSM1O15116 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LSM1O15116 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.4□□□□□ -1.87
LSM1O15116 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LSM1O15116 AL138880.1-201ENST00000405824 642 ntBASIC3.4□□□□□ -1.87
LSM1O15116 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM1O15116 RAB28P1-201ENST00000411517 641 ntBASIC3.4□□□□□ -1.87
LSM1O15116 UBE2V1P11-201ENST00000411559 285 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.4□□□□□ -1.87
LSM1O15116 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM1O15116 SDCBPP3-201ENST00000419629 891 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM1O15116 OFD1P18Y-201ENST00000420889 959 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AL513174.1-201ENST00000423182 629 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM1O15116 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM1O15116 RPS29P7-201ENST00000439662 171 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM1O15116 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM1O15116 AL357552.1-201ENST00000445254 415 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AC108729.2-201ENST00000476543 840 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AP000563.1-201ENST00000490865 758 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AC114967.1-201ENST00000504890 259 ntBASIC3.4□□□□□ -1.87
LSM1O15116 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM1O15116 RN7SKP21-201ENST00000516503 220 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.4□□□□□ -1.87
LSM1O15116 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.4□□□□□ -1.87
LSM1O15116 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM1O15116 AC007224.1-201ENST00000564410 144 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AC106734.1-201ENST00000568646 663 ntBASIC3.4□□□□□ -1.87
LSM1O15116 MIR4504-201ENST00000577413 92 ntBASIC3.4□□□□□ -1.87
LSM1O15116 MIR4474-201ENST00000579189 78 ntBASIC3.4□□□□□ -1.87
LSM1O15116 MAGOH2P-202ENST00000584384 429 ntBASIC3.4□□□□□ -1.87
LSM1O15116 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LSM1O15116 AC090912.3-201ENST00000609775 533 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AL163051.2-201ENST00000618976 735 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AC069209.1-201ENST00000619282 651 ntBASIC3.4□□□□□ -1.87
LSM1O15116 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
LSM1O15116 AP003355.3-201ENST00000623465 114 ntBASIC3.4□□□□□ -1.87
LSM1O15116 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.4□□□□□ -1.87
LSM1O15116 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM1O15116 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.4□□□□□ -1.87
LSM1O15116 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LSM1O15116 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM1O15116 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LSM1O15116 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LSM1O15116 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM1O15116 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM1O15116 MIR30E-201ENST00000362104 92 ntBASIC3.39□□□□□ -1.87
LSM1O15116 RN7SKP227-201ENST00000364445 330 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AC007066.1-201ENST00000392902 381 ntBASIC3.39□□□□□ -1.87
LSM1O15116 MIR887-201ENST00000401258 79 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AL356057.1-202ENST00000402263 756 ntBASIC3.39□□□□□ -1.87
LSM1O15116 SFR1P1-201ENST00000403720 688 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AL031121.1-201ENST00000406553 254 ntBASIC3.39□□□□□ -1.87
LSM1O15116 Y_RNA.625-201ENST00000411256 107 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM1O15116 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM1O15116 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.39□□□□□ -1.87
LSM1O15116 SETP8-201ENST00000435341 628 ntBASIC3.39□□□□□ -1.87
LSM1O15116 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM1O15116 RPS3AP46-201ENST00000448352 682 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AL035407.2-201ENST00000454090 378 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM1O15116 RPL21P8-201ENST00000465083 535 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AC023598.1-201ENST00000472521 361 ntBASIC3.39□□□□□ -1.87
LSM1O15116 SYPL1P1-201ENST00000473622 768 ntBASIC3.39□□□□□ -1.87
LSM1O15116 RN7SL283P-201ENST00000489055 303 ntBASIC3.39□□□□□ -1.87
LSM1O15116 IGKV2D-36-201ENST00000518643 226 ntBASIC3.39□□□□□ -1.87
LSM1O15116 OR4R3P-201ENST00000525084 838 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.39□□□□□ -1.87
LSM1O15116 HSPE1P5-201ENST00000561489 272 ntBASIC3.39□□□□□ -1.87
LSM1O15116 MIR5685-201ENST00000579080 79 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.39□□□□□ -1.87
LSM1O15116 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM1O15116 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM1O15116 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM1O15116 IGHV3-29-201ENST00000604817 344 ntBASIC3.39□□□□□ -1.87
LSM1O15116 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM1O15116 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM1O15116 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM1O15116 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM1O15116 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.39□□□□□ -1.87
LSM1O15116 MFSD8-213ENST00000641134 1327 ntBASIC3.39□□□□□ -1.87
LSM1O15116 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM1O15116 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM1O15116 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM1O15116 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LSM1O15116 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM1O15116 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM1O15116 U8.11-201ENST00000384699 133 ntBASIC3.38□□□□□ -1.87
LSM1O15116 U8.12-201ENST00000384701 133 ntBASIC3.38□□□□□ -1.87
LSM1O15116 RN7SKP123-201ENST00000410732 291 ntBASIC3.38□□□□□ -1.87
LSM1O15116 RNU2-71P-201ENST00000411395 189 ntBASIC3.38□□□□□ -1.87
LSM1O15116 AC073264.1-201ENST00000411508 416 ntBASIC3.38□□□□□ -1.87
LSM1O15116 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM1O15116 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms