Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC135507.2-201ENST00000612443 309 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 ZNF542P-204ENST00000482727 1305 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC138393.1-206ENST00000540997 1886 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNU6-532P-201ENST00000384318 107 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 SNORA48.2-201ENST00000390926 124 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL034374.1-201ENST00000406329 351 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNU4-47P-201ENST00000410876 114 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC023512.1-201ENST00000444513 499 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 CFTRP1-201ENST00000456646 183 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AP000873.1-201ENST00000463987 400 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC087312.1-201ENST00000471411 480 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 RPL23AP44-201ENST00000482216 473 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC020893.1-201ENST00000502452 580 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNU6-1004P-201ENST00000516584 111 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 RN7SKP289-201ENST00000517244 295 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 UBE2NP1-201ENST00000545592 458 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC025918.2-201ENST00000558683 763 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 ZNF192P1-203ENST00000565888 810 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC092953.2-201ENST00000608000 699 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 OR2BH1P-201ENST00000608850 864 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 ZNF90P1-201ENST00000480493 1951 ntBASIC3.31□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL592494.2-201ENST00000425455 1548 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNA5SP167-201ENST00000365461 116 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNU6-650P-201ENST00000365658 111 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNU6-1005P-201ENST00000384519 107 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNU6-1176P-201ENST00000390955 107 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNU6-796P-201ENST00000391086 107 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 RSL24D1P1-201ENST00000404972 493 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 SNORA11.2-201ENST00000408318 127 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 RN7SKP222-201ENST00000410651 315 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNU4-27P-201ENST00000410889 139 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL158050.1-201ENST00000416077 457 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 UBE2D3P3-201ENST00000426992 425 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 USP9YP31-201ENST00000431405 881 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 RPL21P110-201ENST00000433345 446 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 MTCO1P52-201ENST00000433928 531 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 CACYBPP1-201ENST00000438592 684 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 CYCSP20-201ENST00000473154 315 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC010683.1-201ENST00000473673 378 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 APOOP4-201ENST00000513530 597 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC092451.2-201ENST00000538746 658 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL161713.1-201ENST00000555538 145 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC079148.1-201ENST00000565944 819 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 TMF1P1-201ENST00000576058 373 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 MIR4325-201ENST00000583049 90 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 MIR4276-201ENST00000584832 70 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL606834.2-201ENST00000602954 668 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL133445.2-201ENST00000611191 527 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 MIR7112-201ENST00000616126 65 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC022149.2-201ENST00000621061 203 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL021368.2-201ENST00000606125 5352 ntBASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.3□□□□□ -1.88
TMX2-CTNND1H3BSU7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.29□□□□□ -1.88
TMX2-CTNND1H3BSU7 ZNF833P-201ENST00000424938 1494 ntBASIC3.29□□□□□ -1.88
TMX2-CTNND1H3BSU7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms