Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC092470.1-201ENST00000546187 132 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC044913.1-201ENST00000557200 430 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC122134.1-202ENST00000569111 1201 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC141257.3-201ENST00000572906 215 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 MIR4444-1-201ENST00000581696 74 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 MIR4444-2-201ENST00000584390 74 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 BNIP3P27-201ENST00000599991 412 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 IGHV3-29-201ENST00000604817 344 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 HMGB1P50-201ENST00000605814 607 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AL583856.2-201ENST00000606298 543 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC009269.6-201ENST00000621778 588 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AC099654.8-201ENST00000637757 681 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
NPIPA2E9PIF3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 ZNF37BP-203ENST00000452306 1352 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 RNA5SP124-201ENST00000362739 110 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 RNU6-619P-201ENST00000365146 108 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 TMSB4XP8-201ENST00000402089 135 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 MTCO3P31-201ENST00000405526 789 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 RAB9AP3-201ENST00000412737 573 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 TMSB4XP6-201ENST00000415187 135 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC009237.2-201ENST00000421358 284 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 TMSB4XP1-201ENST00000424567 135 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC012497.1-201ENST00000429392 575 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 ATP5HP2-201ENST00000433885 485 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 RANP8-201ENST00000444720 713 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 NPM1P49-201ENST00000448027 714 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AL358232.1-201ENST00000448030 501 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 RAB9AP1-201ENST00000449393 573 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 NF1P3-201ENST00000457709 450 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC008837.1-201ENST00000511513 412 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 PAICSP4-201ENST00000517543 1253 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 NDUFA5P2-201ENST00000519723 344 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 OR4A12P-201ENST00000530847 918 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC087897.1-201ENST00000550134 156 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 ZNF192P1-203ENST00000565888 810 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AL158050.2-201ENST00000605336 568 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AF129408.1-201ENST00000608767 431 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC005344.1-201ENST00000613391 459 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 MIR8058-201ENST00000615737 89 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 MIR6075-201ENST00000620782 95 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC004808.1-201ENST00000627671 721 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 AC012442.3-202ENST00000636742 206 ntBASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPIPA2E9PIF3 MAPK10-253ENST00000641010 4072 ntBASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 RNA5SP306-201ENST00000411087 107 ntBASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 RHEBP3-201ENST00000411920 351 ntBASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 OFD1P18Y-201ENST00000420889 959 ntBASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 AC069157.1-201ENST00000421749 137 ntBASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.52□□□□□ -1.85
NPIPA2E9PIF3 NPM1P13-201ENST00000452663 865 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms