Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 RNA5SP392-201ENST00000516905 112 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 HSPA8P13-201ENST00000523715 472 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 TPMTP1-201ENST00000592307 737 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 FKBP1AP1-201ENST00000594588 318 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC008638.3-201ENST00000603341 463 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC013244.1-201ENST00000604279 193 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC007014.2-201ENST00000615581 479 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC068722.2-201ENST00000618734 544 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC124864.2-201ENST00000624736 186 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AC095050.2-201ENST00000510748 1458 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC66A2RUB6 AL022578.1-201ENST00000439330 1433 ntBASIC5.31□□□□□ -1.56
CCDC66A2RUB6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 RNU4-12P-201ENST00000365233 139 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 SNORA51.6-201ENST00000384151 125 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 CIR1P3-201ENST00000405137 479 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 MIR1178-201ENST00000408396 91 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 DPPA2P1-201ENST00000428060 556 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 RSU1P2-202ENST00000437884 485 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 RABEPKP1-201ENST00000440529 1026 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 MTND6P13-201ENST00000443510 523 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 MTATP6P30-201ENST00000443540 664 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 WASF1P1-201ENST00000447560 1131 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 MTCO1P42-201ENST00000457379 726 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 SCARNA10-201ENST00000459255 330 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 RPL31P50-201ENST00000471002 296 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 OR2AO1P-201ENST00000476497 403 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 RPL21P5-201ENST00000554662 472 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AP005205.1-201ENST00000563503 508 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 BGLT3-201ENST00000564523 994 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 MTND6P33-201ENST00000571794 183 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 BNIP3P30-201ENST00000601184 574 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AL592295.2-201ENST00000612578 206 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC123768.4-201ENST00000616244 701 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC009704.2-201ENST00000618739 483 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC136475.10-201ENST00000620253 385 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC099654.13-201ENST00000639774 207 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AC093535.2-201ENST00000624769 2326 ntBASIC5.3□□□□□ -1.56
CCDC66A2RUB6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC66A2RUB6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC66A2RUB6 PANDAR-201ENST00000629595 1506 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC66A2RUB6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC66A2RUB6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC66A2RUB6 RNA5SP183-201ENST00000362452 119 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 Y_RNA.296-201ENST00000364930 108 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC66A2RUB6 SNORD115-47-201ENST00000391226 86 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC66A2RUB6 ARF4P3-201ENST00000397387 509 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 RPL35AP24-201ENST00000413846 330 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 RPS3AP9-201ENST00000417027 792 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC66A2RUB6 RAD23BP1-201ENST00000421404 1227 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 AC108075.1-201ENST00000424692 529 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 AL445669.1-201ENST00000426743 755 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 RPS26P47-201ENST00000427219 348 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC66A2RUB6 RPL7L1P9-201ENST00000431298 745 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 RPS27P18-201ENST00000431701 247 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 AC000111.3-201ENST00000433478 193 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 AC023347.2-201ENST00000433994 462 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC66A2RUB6 AL450023.3-201ENST00000440592 271 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 AL163193.1-201ENST00000444895 788 ntBASIC5.29□□□□□ -1.56
CCDC66A2RUB6 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms