Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MIR183-201ENST00000384958 110 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 ATP5F1P3-201ENST00000397213 657 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC110754.1-201ENST00000399740 601 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 DNAJC19P6-201ENST00000401853 280 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 AL357075.1-201ENST00000404107 726 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 RPL31P2-201ENST00000413849 377 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 EI24P1-201ENST00000416584 867 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC007563.3-201ENST00000433233 371 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 ARL4AP4-201ENST00000434170 518 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 AL590103.1-201ENST00000434488 307 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 RPL23AP33-201ENST00000442301 452 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AP002812.1-201ENST00000495378 474 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 RN7SKP244-201ENST00000516513 307 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 RPL12P22-201ENST00000519073 490 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 OR4T1P-201ENST00000554933 911 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 HMGB1P51-201ENST00000605166 638 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC012557.1-201ENST00000607115 611 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 AC138932.5-201ENST00000617759 563 ntBASIC3□□□□□ -1.93
VPS29Q9UBQ0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3□□□□□ -1.93
VPS29Q9UBQ0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 SNORA7.2-201ENST00000364446 145 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 RPL21P3-201ENST00000395517 478 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AL590290.1-201ENST00000405336 380 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 RPL23AP47-201ENST00000408017 460 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 RNU4-47P-201ENST00000410876 114 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AC245054.2-201ENST00000415639 319 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 RPL21P112-201ENST00000434403 463 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 ARL5AP3-201ENST00000439327 386 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 MTCO3P17-201ENST00000443775 513 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AC023512.1-201ENST00000444513 499 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 RPL37P3-201ENST00000456825 293 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AC096992.1-201ENST00000459808 709 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AC146507.2-201ENST00000460608 476 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AC109925.1-201ENST00000478069 331 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 RPL23AP55-201ENST00000498163 452 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 KATNBL1P4-201ENST00000503545 918 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 TMEM248P1-201ENST00000510579 951 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 RN7SL339P-201ENST00000580597 296 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AC107294.3-201ENST00000609211 526 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 MIR6864-201ENST00000617935 70 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 MIR7975-201ENST00000619350 68 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 AC118273.1-201ENST00000525324 3006 ntBASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS29Q9UBQ0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AL079305.1-201ENST00000623159 3008 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 SNORD15B-201ENST00000384714 146 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC105402.1-201ENST00000413336 545 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC234782.4-201ENST00000417646 1048 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 HMGB1P12-201ENST00000438594 598 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 Z75741.1-201ENST00000446793 314 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 PRDX3P3-201ENST00000447765 522 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 UQCRHP3-201ENST00000451503 251 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 HMGN2P16-201ENST00000456802 261 ntBASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
VPS29Q9UBQ0 AC091153.1-201ENST00000466297 402 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms