Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.39□□□□□ -1.71
LRFN1Q9P244 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.39□□□□□ -1.71
LRFN1Q9P244 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.39□□□□□ -1.71
LRFN1Q9P244 SETP7-201ENST00000552169 453 ntBASIC4.39□□□□□ -1.71
LRFN1Q9P244 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.39□□□□□ -1.71
LRFN1Q9P244 RN7SL690P-201ENST00000582087 240 ntBASIC4.39□□□□□ -1.71
LRFN1Q9P244 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 AL451044.1-201ENST00000604867 238 ntBASIC4.39□□□□□ -1.71
LRFN1Q9P244 AC055876.5-201ENST00000605667 259 ntBASIC4.39□□□□□ -1.71
LRFN1Q9P244 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 AC022106.2-201ENST00000620114 757 ntBASIC4.39□□□□□ -1.71
LRFN1Q9P244 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 AP000648.2-201ENST00000624182 404 ntBASIC4.39□□□□□ -1.71
LRFN1Q9P244 AC092192.1-201ENST00000633154 1018 ntBASIC4.39□□□□□ -1.71
LRFN1Q9P244 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.39□□□□□ -1.71
LRFN1Q9P244 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.39□□□□□ -1.71
LRFN1Q9P244 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.39□□□□□ -1.71
LRFN1Q9P244 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN1Q9P244 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.39□□□□□ -1.71
LRFN1Q9P244 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN1Q9P244 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN1Q9P244 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC139713.2-215ENST00000641428 5037 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC244517.1-201ENST00000606030 2086 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 CR383658.2-201ENST00000547576 1525 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN1Q9P244 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AL161781.1-201ENST00000354277 403 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 RNA5SP258-201ENST00000362750 119 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 RNA5SP332-201ENST00000391063 115 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 HSFY4P-201ENST00000415994 1181 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 PRELID3BP10-201ENST00000431957 584 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 RSU1P2-202ENST00000437884 485 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 LSM1P1-201ENST00000438629 273 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 RPL7P52-201ENST00000449200 742 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AL353691.1-201ENST00000451332 387 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 RPS4XP10-201ENST00000465034 731 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC017015.1-201ENST00000477387 286 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 HMGB1P36-201ENST00000487709 576 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC022447.3-201ENST00000506865 495 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 RN7SKP92-201ENST00000517266 244 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 OR4P1P-201ENST00000530808 1136 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AL110118.1-201ENST00000553543 400 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 MIR4284-201ENST00000578924 81 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 RN7SL435P-201ENST00000584418 282 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC040904.1-201ENST00000590850 223 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC005255.1-201ENST00000593748 216 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC010620.1-201ENST00000601088 1102 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 RPL26P30-202ENST00000602923 645 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC112187.2-201ENST00000604345 283 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC004853.1-201ENST00000604902 698 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC105129.3-201ENST00000605455 485 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AL451064.1-201ENST00000607718 471 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC097468.3-201ENST00000607956 456 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC107214.2-201ENST00000608204 634 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC019193.2-201ENST00000610012 634 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC008443.7-201ENST00000622195 246 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN1Q9P244 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN1Q9P244 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN1Q9P244 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN1Q9P244 AC009643.2-201ENST00000603543 1448 ntBASIC4.38□□□□□ -1.71
LRFN1Q9P244 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
LRFN1Q9P244 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN1Q9P244 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN1Q9P244 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN1Q9P244 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN1Q9P244 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms