Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC093765.1-201ENST00000603758 881 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AL139344.1-201ENST00000605228 195 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AL355816.1-201ENST00000607951 118 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 FAM25E-202ENST00000608562 189 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC099676.1-201ENST00000608886 657 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 MIR6868-201ENST00000611215 58 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 CR392039.4-201ENST00000624968 501 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 CDRT1-208ENST00000630868 794 ntBASIC3.67□□□□□ -1.82
NDE1Q9NXR1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.67□□□□□ -1.82
NDE1Q9NXR1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 RNU1-132P-201ENST00000364300 164 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC011933.1-201ENST00000413334 321 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 OR51A3P-201ENST00000413596 924 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 RPL26P29-201ENST00000415623 438 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 RPS15AP6-201ENST00000420703 385 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 FAR2P4-202ENST00000425399 584 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 USP9YP9-201ENST00000429406 715 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 ACTR3P2-201ENST00000439585 1257 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 Z77249.1-201ENST00000444622 1175 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 snoU13.1-201ENST00000459157 104 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 SNORD108-201ENST00000459332 71 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC116533.1-201ENST00000459748 321 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 GAPDHP39-201ENST00000481866 979 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 RPS3AP50-201ENST00000487064 803 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 DYNLL1P6-201ENST00000503440 264 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 BOLA3P3-201ENST00000505182 232 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 UBTFL10-201ENST00000528532 562 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 MIR4666A-201ENST00000580160 79 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 NIFKP6-201ENST00000598115 845 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AL353778.1-201ENST00000603149 408 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC005191.1-201ENST00000603950 358 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC105227.2-201ENST00000615075 605 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC022079.1-201ENST00000621546 602 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 AC046144.1-201ENST00000478559 1853 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
NDE1Q9NXR1 MFSD8-236ENST00000641509 4050 ntBASIC3.66□□□□□ -1.82
NDE1Q9NXR1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
NDE1Q9NXR1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
NDE1Q9NXR1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.65□□□□□ -1.82
NDE1Q9NXR1 GABPAP-201ENST00000419271 1356 ntBASIC3.65□□□□□ -1.82
NDE1Q9NXR1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
NDE1Q9NXR1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.65□□□□□ -1.82
NDE1Q9NXR1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.65□□□□□ -1.82
NDE1Q9NXR1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC016716.1-201ENST00000265882 708 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 RNU6-83P-201ENST00000384568 112 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL136116.1-201ENST00000403591 381 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 HMGB1P49-201ENST00000418882 569 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 USP9YP31-201ENST00000431405 881 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 RPL7P34-201ENST00000433316 712 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 MTCYBP31-201ENST00000438855 1122 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 RPL23AP76-201ENST00000441860 458 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC004865.1-201ENST00000442276 1003 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 RAB11AP1-201ENST00000442978 646 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC073264.2-201ENST00000448886 166 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC099563.1-201ENST00000456086 418 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms