Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC005771.1-201ENST00000585581 349 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 PRELID3BP8-201ENST00000604148 295 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC025588.4-201ENST00000615802 908 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 FAM157B-203ENST00000639350 358 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 AC130650.2-201ENST00000618736 2403 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VTA1Q9NP79 SMG1P4-204ENST00000523028 4131 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTA1Q9NP79 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTA1Q9NP79 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTA1Q9NP79 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTA1Q9NP79 AL450326.2-201ENST00000421913 1962 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 AL731532.2-201ENST00000623542 1953 ntBASIC5.2□□□□□ -1.58
VTA1Q9NP79 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.2□□□□□ -1.58
VTA1Q9NP79 MAPK10-349ENST00000641767 3661 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 SALL4P2-201ENST00000423288 2910 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AL672167.1-205ENST00000641112 3080 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTA1Q9NP79 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 RNU6-1226P-201ENST00000384317 107 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 EIF5P1-201ENST00000400019 1231 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 TPMTP2-201ENST00000414372 726 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 E2F6P2-201ENST00000420708 748 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC004448.2-201ENST00000422360 586 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 PRELID3BP10-201ENST00000431957 584 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 EPS15P1-201ENST00000448836 336 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 USP9YP34-201ENST00000453983 808 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC104563.1-201ENST00000476147 376 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 SNORD116-26-201ENST00000516006 96 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 IGLVIV-65-201ENST00000517313 360 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 OR6C73P-201ENST00000546432 358 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 MIR3939-201ENST00000582614 106 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC090186.1-201ENST00000605991 572 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 AC008121.2-201ENST00000614647 523 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTA1Q9NP79 AP002907.1-201ENST00000606361 1430 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 MFSD8-242ENST00000641690 4199 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.19□□□□□ -1.58
VTA1Q9NP79 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTA1Q9NP79 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VTA1Q9NP79 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTA1Q9NP79 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTA1Q9NP79 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
VTA1Q9NP79 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC006971.1-201ENST00000407916 4486 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 RNU4-75P-201ENST00000364621 146 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VTA1Q9NP79 ARF4P3-201ENST00000397387 509 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 DEFB108C-201ENST00000400154 252 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 MTCO2P5-201ENST00000422621 426 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC104333.2-201ENST00000422630 192 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 RPL30P3-201ENST00000424262 333 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 RPS20P1-201ENST00000434853 354 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 Z74696.2-201ENST00000436514 498 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 RN7SL303P-201ENST00000469773 251 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 RN7SL810P-201ENST00000493031 276 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 TMEM251P1-201ENST00000503717 318 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.18□□□□□ -1.58
VTA1Q9NP79 AC109464.2-201ENST00000510242 943 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 FABP5P5-201ENST00000515537 406 ntBASIC5.18□□□□□ -1.58
VTA1Q9NP79 RNU6-405P-201ENST00000516637 110 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms