Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC006349.1-201ENST00000555526 235 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC124312.5-201ENST00000604451 268 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC019193.3-201ENST00000609144 554 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC244107.2-201ENST00000611773 76 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 uc_338.15-201ENST00000615470 191 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC025574.2-201ENST00000615621 514 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 MIR6839-201ENST00000620425 113 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 AC135068.12-201ENST00000637370 931 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 RBPJP2-201ENST00000618187 1444 ntBASIC5.47□□□□□ -1.53
SSU72Q9NP77 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSU72Q9NP77 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.47□□□□□ -1.53
SSU72Q9NP77 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SSU72Q9NP77 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
SSU72Q9NP77 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.46□□□□□ -1.53
SSU72Q9NP77 AC091305.2-201ENST00000624049 1576 ntBASIC5.46□□□□□ -1.53
SSU72Q9NP77 AC144833.1-201ENST00000567953 4089 ntBASIC5.46□□□□□ -1.53
SSU72Q9NP77 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SSU72Q9NP77 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSU72Q9NP77 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSU72Q9NP77 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSU72Q9NP77 Y_RNA.445-201ENST00000384168 102 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 RNU6-1207P-201ENST00000384343 107 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 RNY4P36-201ENST00000391116 96 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 RNU4-26P-201ENST00000410270 107 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC126120.1-201ENST00000431082 470 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 OR4K11P-201ENST00000431829 904 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AL035090.1-201ENST00000454835 332 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 TRBV26-201ENST00000456572 344 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC245028.2-201ENST00000458673 253 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 RNU7-66P-201ENST00000459469 62 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 RPL7L1P8-201ENST00000469911 741 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 RPL21P99-201ENST00000480369 423 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC068587.1-201ENST00000483613 781 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 RPL23AP41-201ENST00000484754 458 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 RN7SL193P-201ENST00000491708 276 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 RPS27P20-201ENST00000492051 246 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 RNA5SP441-201ENST00000516809 88 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 MYL12AP1-201ENST00000518490 515 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 LSM6P2-201ENST00000552208 177 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 OR4K8P-201ENST00000578842 1048 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 RN7SL230P-201ENST00000580835 303 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 MIR4424-201ENST00000585257 86 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC006006.1-201ENST00000603082 144 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 APOOP1-201ENST00000604695 592 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AL022345.1-201ENST00000607292 135 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC092266.1-201ENST00000610958 165 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 uc_338.12-201ENST00000616344 181 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC037198.3-201ENST00000616754 526 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AL122125.1-201ENST00000616999 600 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC000123.2-201ENST00000623124 461 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 AC015908.5-201ENST00000623289 343 ntBASIC5.46□□□□□ -1.54
SSU72Q9NP77 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSU72Q9NP77 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSU72Q9NP77 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.46□□□□□ -1.54
SSU72Q9NP77 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSU72Q9NP77 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 AP004289.2-201ENST00000444413 1457 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 AC114947.2-201ENST00000565748 2125 ntBASIC5.45□□□□□ -1.54
SSU72Q9NP77 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSU72Q9NP77 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms