Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AC245054.2-201ENST00000415639 319 ntBASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AC093084.1-201ENST00000424233 687 ntBASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AC009969.1-201ENST00000438726 172 ntBASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AC012170.1-201ENST00000495139 359 ntBASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AC006504.3-201ENST00000586818 523 ntBASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 GMCL1P2-201ENST00000605230 823 ntBASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AC012531.5-201ENST00000611375 151 ntBASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AC099506.2-201ENST00000623074 221 ntBASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 AL137790.1-201ENST00000634283 177 ntBASIC2.69□□□□□ -1.98
KIAA1549Q9HCM3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 MTCO1P14-201ENST00000441695 1559 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 SNORD15B-201ENST00000384714 146 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 RPS15AP6-201ENST00000420703 385 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 AC125238.1-201ENST00000448842 249 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 RPL7P31-201ENST00000450192 724 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 RN7SL20P-201ENST00000488827 297 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 AC011492.1-201ENST00000600023 315 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 PSMA6P4-201ENST00000603247 718 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 AC034236.3-201ENST00000605999 461 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.68□□□□□ -1.98
KIAA1549Q9HCM3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 AL390023.1-201ENST00000428836 262 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 AL645939.1-201ENST00000453429 797 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 HMGB1P3-201ENST00000502802 616 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 uc_338.1-201ENST00000612113 180 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 AL713922.2-201ENST00000619384 716 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 OR2AS1P-201ENST00000427827 319 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 NIPA2P5-201ENST00000452282 464 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 VN1R104P-201ENST00000505115 1009 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.67□□□□□ -1.98
KIAA1549Q9HCM3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AC138393.1-206ENST00000540997 1886 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 RNU1-35P-201ENST00000362782 153 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 SNORA5B-201ENST00000363786 132 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AL049610.1-201ENST00000423374 372 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AC244033.1-201ENST00000426826 870 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AC107083.1-201ENST00000439643 279 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AC087385.1-201ENST00000475062 312 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AL389895.1-201ENST00000554127 252 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 FAM106CP-201ENST00000582212 507 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 MIR7106-201ENST00000612419 65 ntBASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
KIAA1549Q9HCM3 UBE2V1P2-201ENST00000397758 440 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AC110754.1-201ENST00000399740 601 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 BTG3P1-201ENST00000435859 716 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 USP9YP7-201ENST00000436723 430 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 USP9YP32-201ENST00000452432 430 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AC034159.1-201ENST00000513885 583 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms