Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AL603755.1-201ENST00000619504 163 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AP003072.4-201ENST00000624580 310 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AP003399.1-201ENST00000637534 361 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC103706.2-201ENST00000638080 240 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AL513185.3-201ENST00000433335 1300 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 ZNF542P-204ENST00000482727 1305 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.16□□□□□ -1.74
PCDH9Q9HC56 AC022031.1-201ENST00000585985 2593 ntBASIC4.15□□□□□ -1.74
PCDH9Q9HC56 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.15□□□□□ -1.74
PCDH9Q9HC56 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDH9Q9HC56 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PCDH9Q9HC56 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 RNU5D-1-201ENST00000363299 116 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 MIR3074-201ENST00000384885 81 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 RNU11-4P-201ENST00000391149 133 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 RPS26P8-201ENST00000393490 348 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 ZNF603P-201ENST00000405613 487 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 MIR1302-8-201ENST00000408342 128 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 MIR1251-201ENST00000408552 70 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC090960.1-201ENST00000421072 306 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 UBE2V1P1-201ENST00000430836 445 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 RPL37P1-201ENST00000432310 284 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 UBE2D3P4-201ENST00000441973 436 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 MTCO2P25-201ENST00000447065 681 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 RPL5P24-201ENST00000463742 885 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 LINC00888-204ENST00000487386 421 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 SETP14-201ENST00000497538 873 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 RPF2P2-201ENST00000504693 896 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 MTCYBP16-201ENST00000509187 1129 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC079395.1-201ENST00000510981 262 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC010587.2-201ENST00000511727 448 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 RNU6-202P-201ENST00000515998 96 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC025884.1-201ENST00000556034 378 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 VN1R82P-201ENST00000601481 356 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AL390838.2-201ENST00000602394 274 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC106791.2-201ENST00000604680 391 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AL590392.1-201ENST00000604960 446 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AL607023.1-201ENST00000620045 248 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 AC005539.1-201ENST00000443768 1479 ntBASIC4.15□□□□□ -1.75
PCDH9Q9HC56 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PCDH9Q9HC56 MTND5P31-201ENST00000419366 1374 ntBASIC4.14□□□□□ -1.75
PCDH9Q9HC56 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDH9Q9HC56 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH9Q9HC56 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PCDH9Q9HC56 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
PCDH9Q9HC56 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
PCDH9Q9HC56 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDH9Q9HC56 UBE3AP2-201ENST00000429033 2259 ntBASIC4.14□□□□□ -1.75
PCDH9Q9HC56 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDH9Q9HC56 OR11H4-201ENST00000315409 1082 ntBASIC4.14□□□□□ -1.75
PCDH9Q9HC56 AL121657.1-201ENST00000327215 531 ntBASIC4.14□□□□□ -1.75
PCDH9Q9HC56 SNORA70C-201ENST00000384538 135 ntBASIC4.14□□□□□ -1.75
PCDH9Q9HC56 SNORD116-23-201ENST00000384645 92 ntBASIC4.14□□□□□ -1.75
PCDH9Q9HC56 SKINT1L-201ENST00000401057 817 ntBASIC4.14□□□□□ -1.75
PCDH9Q9HC56 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDH9Q9HC56 AL136133.1-201ENST00000413694 376 ntBASIC4.14□□□□□ -1.75
PCDH9Q9HC56 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDH9Q9HC56 BOLA3P4-201ENST00000418151 400 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms