Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 IGKV2D-36-201ENST00000518643 226 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 OR4A45P-201ENST00000529954 901 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC090502.2-201ENST00000549267 280 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC138915.2-201ENST00000569776 97 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 RPL23AP87-202ENST00000573039 466 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 MIR5684-201ENST00000585074 65 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 VN1R85P-201ENST00000601587 426 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC106052.1-201ENST00000608029 497 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC024941.1-201ENST00000612250 334 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC024257.5-201ENST00000612739 531 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AL078595.3-201ENST00000623815 1166 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 AC095050.2-201ENST00000510748 1458 ntBASIC3.73□□□□□ -1.81
UBQLN3Q9H347 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
UBQLN3Q9H347 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC099786.3-201ENST00000565735 1410 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 SNORA60-201ENST00000362396 134 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 RNU6-374P-201ENST00000364146 108 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 SUGT1P1-201ENST00000379514 476 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 RNU6-413P-201ENST00000384115 107 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 RNU6-906P-201ENST00000384700 70 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 MT-TC-201ENST00000387405 66 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AL121972.1-201ENST00000402023 252 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 RPL21P65-201ENST00000406094 466 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 RNU2-28P-201ENST00000410457 189 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AMD1P2-201ENST00000412936 992 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AL161449.1-201ENST00000414531 1199 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 RPL21P89-201ENST00000444021 467 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC020898.1-201ENST00000474167 787 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 MTCYBP37-201ENST00000510642 1133 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 ZNF705CP-201ENST00000530515 889 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC023813.2-201ENST00000564321 469 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AL390838.2-201ENST00000602394 274 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 MTND3P19-201ENST00000603825 345 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC114878.2-201ENST00000604863 1251 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 HMGB1P50-201ENST00000605814 607 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AL513477.2-201ENST00000607858 568 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC009974.1-201ENST00000608881 455 ntBASIC3.72□□□□□ -1.81
UBQLN3Q9H347 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBQLN3Q9H347 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
UBQLN3Q9H347 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
UBQLN3Q9H347 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
UBQLN3Q9H347 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 ZNF734P-201ENST00000419494 1534 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 Y_RNA.126-201ENST00000363382 111 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 RNVU1-3-201ENST00000364313 161 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 RNA5SP283-201ENST00000365604 119 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 RNU6-657P-201ENST00000383904 107 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 HSPE1P12-201ENST00000412576 301 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 AC244098.2-201ENST00000422068 99 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 SDCBPP2-201ENST00000424643 885 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 VN1R25P-201ENST00000443385 738 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 MTCO1P48-201ENST00000448024 1096 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 NPM1P49-201ENST00000448027 714 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 AL162151.2-201ENST00000448875 158 ntBASIC3.71□□□□□ -1.82
UBQLN3Q9H347 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.71□□□□□ -1.82
UBQLN3Q9H347 AC104073.1-201ENST00000451988 151 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms