Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM4Q9C037 GTF2H2B-203ENST00000508065 1432 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 U3.19-201ENST00000390893 196 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 MTND4LP20-201ENST00000402379 270 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 U3.39-201ENST00000408569 239 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 AC007899.1-201ENST00000412776 775 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 MTND4P22-201ENST00000413116 1169 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 AC009965.2-201ENST00000425328 970 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 YWHAZP7-201ENST00000436906 631 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM4Q9C037 AC104308.1-201ENST00000454621 333 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 BTF3P5-201ENST00000457252 467 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM4Q9C037 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 AC103843.2-201ENST00000530523 682 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM4Q9C037 AL157394.1-201ENST00000562983 1224 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 AC006077.1-201ENST00000604746 343 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM4Q9C037 AC123768.4-201ENST00000616244 701 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM4Q9C037 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM4Q9C037 AC068647.1-201ENST00000489539 2265 ntBASIC3.38□□□□□ -1.87
TRIM4Q9C037 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TRIM4Q9C037 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM4Q9C037 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM4Q9C037 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM4Q9C037 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM4Q9C037 SNORD9-201ENST00000362566 104 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 U8.9-201ENST00000365667 134 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 BX323014.1-201ENST00000412876 237 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 BMS1P22-201ENST00000414726 313 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 TRIM60P18-201ENST00000441518 828 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 SNORD105B-201ENST00000458770 79 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC021205.1-201ENST00000468797 348 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC108078.3-201ENST00000502633 489 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC010486.1-201ENST00000511793 424 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 RN7SKP282-201ENST00000516824 299 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC022790.1-201ENST00000522872 204 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC007536.1-201ENST00000533382 349 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC026333.2-201ENST00000542164 106 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC009303.3-201ENST00000591103 736 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 AC022149.2-201ENST00000621061 203 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 AL590240.3-201ENST00000621416 943 ntBASIC3.37□□□□□ -1.87
TRIM4Q9C037 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM4Q9C037 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM4Q9C037 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM4Q9C037 AL118496.1-201ENST00000440201 1812 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 RPL23AP57-201ENST00000332361 466 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 U3.11-201ENST00000364476 212 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 SNORA51.4-201ENST00000364993 124 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM4Q9C037 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM4Q9C037 SNORA70E-201ENST00000384492 135 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 HMGB1P10-201ENST00000395823 563 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 HMGB3P18-201ENST00000406327 590 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 RNA5SP344-201ENST00000411081 104 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 RN7SKP53-201ENST00000411337 315 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 RANP4-201ENST00000413361 655 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 PRELID3BP11-201ENST00000414230 479 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 DBIP2-201ENST00000419076 262 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 AL513174.1-201ENST00000423182 629 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 AL035458.1-201ENST00000433096 585 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 ISCA1P2-201ENST00000438679 421 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 HMGN2P21-201ENST00000447764 270 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 KC877373.1-201ENST00000479066 408 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 RN7SL504P-201ENST00000494496 287 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 AP001960.1-201ENST00000506494 658 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 SNORA70.18-201ENST00000516696 98 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 SNORA31.26-201ENST00000517250 137 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 RANP9-201ENST00000519957 271 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms