Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 AL162730.1-201ENST00000605734 292 ntBASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 MIR6837-201ENST00000620884 64 ntBASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 AC138649.5-201ENST00000637456 137 ntBASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.47□□□□□ -1.53
FOXP3Q9BZS1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
FOXP3Q9BZS1 NMD3P1-201ENST00000439704 1488 ntBASIC5.46□□□□□ -1.53
FOXP3Q9BZS1 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
FOXP3Q9BZS1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 OR5J1P-201ENST00000313544 939 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 RPL23AP57-201ENST00000332361 466 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 Y_RNA.46-201ENST00000362695 102 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 RNU6-444P-201ENST00000383988 108 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 RNU1-77P-201ENST00000390868 162 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 HMGB3P7-201ENST00000400214 611 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 RPS4XP8-201ENST00000402039 771 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC211486.3-201ENST00000412694 621 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 TPMTP2-201ENST00000414372 726 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 RPL7L1P9-201ENST00000431298 745 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 CYCSP12-201ENST00000437729 300 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC019185.1-201ENST00000442718 389 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 HMGB1P4-201ENST00000455362 567 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 RN7SL727P-201ENST00000482164 296 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC023424.1-201ENST00000496058 459 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 RFPL4AP5-201ENST00000514977 504 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 RNU6-835P-201ENST00000516974 104 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 COX6CP8-201ENST00000522620 226 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AP003072.1-201ENST00000531740 145 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC078814.3-201ENST00000553036 491 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AL109766.1-201ENST00000555080 552 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC037471.2-201ENST00000564941 598 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC090312.1-201ENST00000580637 348 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 SNORD39.3-201ENST00000584451 71 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC012616.1-201ENST00000600294 197 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AL512329.2-201ENST00000607350 548 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC090527.3-201ENST00000619041 548 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AP001005.3-201ENST00000622049 129 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC132068.1-201ENST00000623805 459 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC073869.10-201ENST00000642016 354 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AC005005.4-201ENST00000623789 16698 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 AL034549.2-201ENST00000618285 3373 ntBASIC5.46□□□□□ -1.54
FOXP3Q9BZS1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC112198.2-201ENST00000426589 6996 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AL645937.1-201ENST00000641739 1652 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC127391.1-201ENST00000411737 98 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 MTATP6P18-201ENST00000417994 673 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC008280.1-201ENST00000418851 412 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AL139148.1-201ENST00000427122 680 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 MTCO3P21-201ENST00000430791 643 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 CYCSP6-201ENST00000434498 302 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AL136380.1-201ENST00000447970 162 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AC140076.1-201ENST00000449897 361 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 RPL23AP15-201ENST00000450202 459 ntBASIC5.45□□□□□ -1.54
FOXP3Q9BZS1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms