Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNGAP1Q96PV0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SYNGAP1Q96PV0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNGAP1Q96PV0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.96□□□□□ -1.45
SYNGAP1Q96PV0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SYNGAP1Q96PV0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNGAP1Q96PV0 CKAP2P1-201ENST00000555477 2049 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC093671.1-201ENST00000624981 2929 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 SNORA5.1-201ENST00000384275 131 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 SNORD115.1-201ENST00000391109 76 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AL133482.1-201ENST00000415988 498 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC073069.1-201ENST00000428657 441 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 DNAJC19P7-201ENST00000428811 344 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AL031663.1-201ENST00000437445 219 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 BRK1P2-201ENST00000442875 223 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 KNOP1P3-201ENST00000446933 426 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 RBMY2TP-201ENST00000451162 947 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 RPSAP51-201ENST00000497462 645 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 RN7SKP21-201ENST00000516503 220 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 RNU7-30P-201ENST00000516835 62 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC099489.2-201ENST00000574976 260 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC244107.2-201ENST00000611773 76 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC024940.5-201ENST00000622889 474 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC135068.12-201ENST00000637370 931 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 AC010149.2-201ENST00000637608 315 ntBASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNGAP1Q96PV0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 MFSD8-216ENST00000641147 4009 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 Y_RNA.159-201ENST00000363674 87 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 SNORA51.2-201ENST00000364595 132 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 RNU6-1151P-201ENST00000384684 107 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AL354719.1-201ENST00000406535 843 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 RN7SKP266-201ENST00000410232 287 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 GPS2P1-201ENST00000411761 986 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 GJA6P-201ENST00000415117 1042 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 COX6B1P1-201ENST00000415962 213 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AC013429.2-201ENST00000418798 781 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 SAR1AP4-201ENST00000429225 591 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 RNU7-136P-201ENST00000458819 69 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 RPL7AP10-201ENST00000481016 791 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AC114967.1-201ENST00000504890 259 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 RNA5SP401-201ENST00000515920 127 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 RNU6-202P-201ENST00000515998 96 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 RN7SKP260-201ENST00000516907 149 ntBASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNGAP1Q96PV0 PSMA3P-201ENST00000555485 635 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms