Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AL645937.1-201ENST00000641739 1652 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 RPL7P26-201ENST00000333817 754 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 MIR490-201ENST00000384865 128 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 VTA1P1-201ENST00000414044 866 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 BX842559.1-201ENST00000419615 532 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC241520.1-201ENST00000422654 1099 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 ETF1P3-201ENST00000430422 1160 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 HMGB1P48-201ENST00000446155 598 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC069540.1-201ENST00000446320 988 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 RPL29P29-201ENST00000448725 423 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC125238.1-201ENST00000448842 249 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC146507.1-201ENST00000468335 354 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 OR5H3P-201ENST00000502817 919 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 RPL7L1P13-201ENST00000511702 739 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC008494.2-201ENST00000514544 370 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 NTAN1P1-201ENST00000603150 646 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC018618.2-201ENST00000604770 446 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC096577.2-201ENST00000611455 153 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 MIR4496-201ENST00000635896 61 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 FAM157B-203ENST00000639350 358 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC017071.1-201ENST00000564407 2204 ntBASIC3.44□□□□□ -1.86
C9orf72Q96LT7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
C9orf72Q96LT7 AC092326.2-201ENST00000624772 1561 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 MTND5P3-201ENST00000438536 1800 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 METTL21EP-201ENST00000298105 713 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 RNU6-805P-201ENST00000365643 106 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 RNVU1-14-201ENST00000384770 164 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 RNA5SP293-201ENST00000410527 113 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 XKRYP4-201ENST00000414395 483 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 KRR1P1-201ENST00000419430 803 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 PSMA2P3-201ENST00000429685 675 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC097713.2-201ENST00000430199 356 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 ATP5JP1-201ENST00000431631 322 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 RPL23AP33-201ENST00000442301 452 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 XKRYP5-201ENST00000449659 483 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 BX276092.4-201ENST00000452056 248 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 snoU13.7-201ENST00000459220 104 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC093331.1-201ENST00000521474 169 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC139103.1-201ENST00000534696 1030 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC067805.1-201ENST00000559344 470 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AL355365.1-201ENST00000616480 294 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 SRP72P2-201ENST00000344851 1979 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 AC005183.1-201ENST00000603687 1979 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
C9orf72Q96LT7 ZNF542P-204ENST00000482727 1305 ntBASIC3.43□□□□□ -1.86
C9orf72Q96LT7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
C9orf72Q96LT7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms