Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC108479.2-201ENST00000617314 601 ntBASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 AC006378.2-201ENST00000623178 2476 ntBASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 PROS2P-201ENST00000474651 1951 ntBASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 USP9YP4-201ENST00000424401 1745 ntBASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHAMP1Q96JM3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 RN7SKP227-201ENST00000364445 330 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 FGF7P8-201ENST00000402994 292 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AL078604.1-201ENST00000404609 466 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 U3.36-201ENST00000408418 213 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 RNU2-28P-201ENST00000410457 189 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 Z74021.1-201ENST00000423610 407 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 SDCBPP2-201ENST00000424643 885 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 ACTR3P2-201ENST00000439585 1257 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 MTCO3P18-201ENST00000440206 761 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 RPS23P7-201ENST00000466210 444 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC092324.1-201ENST00000468671 324 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC092989.1-201ENST00000481235 277 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 POU5F1P7-201ENST00000508759 541 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC108064.1-201ENST00000513791 460 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC018442.3-201ENST00000523025 183 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC013828.2-201ENST00000532487 235 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 VN1R84P-201ENST00000593697 235 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC087783.2-201ENST00000605070 562 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 BCRP9-201ENST00000605312 388 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC091979.2-201ENST00000607514 214 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC080013.4-201ENST00000607624 649 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC104458.1-201ENST00000608243 463 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AL451049.1-201ENST00000608672 497 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC103710.1-201ENST00000610003 901 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC008250.2-201ENST00000615261 205 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC006338.1-201ENST00000618453 749 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AL139089.1-201ENST00000620372 975 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 AC104985.2-201ENST00000620598 500 ntBASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHAMP1Q96JM3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 DHX9P1-201ENST00000436565 3076 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 OR4K15-201ENST00000305051 1216 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 RNU6-797P-201ENST00000363101 109 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 RNU1-82P-201ENST00000390851 165 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 U3.30-201ENST00000391308 210 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 CCNG1P1-201ENST00000406783 885 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 AL513174.1-201ENST00000423182 629 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 AC068287.1-201ENST00000430283 295 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 RPS17P8-201ENST00000434525 335 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 PPIAP13-201ENST00000434706 478 ntBASIC5.49□□□□□ -1.53
CHAMP1Q96JM3 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms