Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AC097262.1-201ENST00000452559 548 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 NPM1P13-201ENST00000452663 865 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 RPS24P6-201ENST00000452670 400 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 HMGB1P15-201ENST00000453854 435 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 CYCSP20-201ENST00000473154 315 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AC025518.1-201ENST00000479856 347 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 ACTR3P3-201ENST00000480448 893 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AC092185.1-201ENST00000491371 97 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 HMGB1P22-201ENST00000505315 124 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 RN7SKP18-201ENST00000516005 275 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 SNORD59.2-201ENST00000516873 68 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AL451086.1-201ENST00000605596 223 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AL590240.3-201ENST00000621416 943 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AC006963.1-201ENST00000624003 1052 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 ZNF285B-201ENST00000561698 1767 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 Y_RNA.126-201ENST00000363382 111 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AL445189.1-201ENST00000405722 338 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AL591034.1-201ENST00000407447 340 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 MIR1303-201ENST00000408625 86 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 RNU4-65P-201ENST00000410473 140 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 RANP4-201ENST00000413361 655 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 XKRYP6-201ENST00000440468 1116 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 XKRYP3-201ENST00000442113 1116 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC069540.1-201ENST00000446320 988 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC093392.2-201ENST00000450682 337 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 snoU13.24-201ENST00000458998 104 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC021146.5-201ENST00000503544 545 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC091917.2-201ENST00000505002 744 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 FABP5P12-201ENST00000515543 389 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 TRAV37-201ENST00000553906 342 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC107954.1-201ENST00000565906 727 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC022387.2-201ENST00000604050 448 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC091488.1-201ENST00000604239 660 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC004832.5-201ENST00000608677 401 ntBASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.26□□□□□ -1.89
CLHC1Q8NHS4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC117529.2-201ENST00000512159 2068 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 OR52E6-202ENST00000379946 954 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC010385.1-201ENST00000412374 256 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 UBE2V1P1-201ENST00000430836 445 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 KCTD10P1-201ENST00000434203 625 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC008264.1-201ENST00000447612 367 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC140076.1-201ENST00000449897 361 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC073387.1-201ENST00000453261 709 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 RPL23AP67-201ENST00000465341 474 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 RN7SL442P-201ENST00000473804 320 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 TXNP6-201ENST00000510190 310 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 SERPINE4P-201ENST00000554978 281 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC008507.1-201ENST00000587506 734 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC093227.2-201ENST00000589357 285 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC020914.6-201ENST00000594327 272 ntBASIC3.25□□□□□ -1.89
CLHC1Q8NHS4 AC068831.7-201ENST00000616954 363 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms