Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 ANKRD36P1-201ENST00000344424 659 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 RNU5E-10P-201ENST00000363506 118 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 RN7SKP44-201ENST00000363602 316 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AL359837.1-201ENST00000381357 287 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 ATP5F1P3-201ENST00000397213 657 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 GSTA8P-201ENST00000404253 637 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 RN7SKP27-201ENST00000410684 333 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 RNU6-575P-201ENST00000411326 105 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 RPS7P9-201ENST00000414704 586 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 NUP35P2-201ENST00000416748 943 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC127526.1-201ENST00000417526 366 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC027644.1-201ENST00000419595 298 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AL513175.1-201ENST00000431492 780 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC010655.1-201ENST00000449336 292 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 RPS15AP1-201ENST00000457423 391 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 RPL6P9-201ENST00000466502 859 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 RN7SKP18-201ENST00000516005 275 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 SOD1P3-201ENST00000518682 454 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC026403.1-201ENST00000518938 295 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 EIF5A2P1-201ENST00000564027 460 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AP000238.1-201ENST00000608759 426 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AL034408.1-202ENST00000636088 415 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 AL139811.1-201ENST00000424779 2299 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 Z73965.1-201ENST00000623412 2297 ntBASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
C9orf40Q8IXQ3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 SNORD9-201ENST00000362566 104 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 RNU6-619P-201ENST00000365146 108 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 Y_RNA.578-201ENST00000390903 88 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 DSTNP4-201ENST00000399472 474 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 RNU2-21P-201ENST00000410368 188 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 VN1R51P-201ENST00000411675 945 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 MTND4P3-201ENST00000417829 541 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 RWDD4P2-201ENST00000426392 563 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 MOB1AP1-201ENST00000430903 535 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC010881.1-201ENST00000433830 235 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 snoU13.7-201ENST00000459220 104 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 snoU109.3-201ENST00000459477 145 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC010307.1-201ENST00000467206 836 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 S100A11P1-201ENST00000477525 312 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 CAB39P1-201ENST00000502277 460 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC096571.1-202ENST00000506634 735 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 RN7SKP83-201ENST00000516512 178 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC021451.1-201ENST00000523498 1129 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 PTP4A1P6-201ENST00000531034 478 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 LRRC6P1-201ENST00000532188 885 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 KLKP1-201ENST00000595979 403 ntBASIC3.36□□□□□ -1.87
C9orf40Q8IXQ3 AC096947.1-201ENST00000603233 470 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms