Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 LLPHP1-201ENST00000603571 367 ntBASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 AL451086.1-201ENST00000605596 223 ntBASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC50Q8IVM0 AC021755.1-201ENST00000559747 1447 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AL133383.2-201ENST00000622958 2336 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AP001148.1-201ENST00000624124 2359 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AL512646.1-201ENST00000269395 1077 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 SNORD56.3-201ENST00000363507 71 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 DNAJC19P6-201ENST00000401853 280 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 RPL23AP82-202ENST00000427528 469 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AC008280.2-201ENST00000455473 307 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AC091959.2-201ENST00000477363 321 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 RPL21P103-201ENST00000479921 488 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AC010265.1-201ENST00000513509 211 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 RN7SKP18-201ENST00000516005 275 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 MIR4506-201ENST00000584693 77 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AC005972.3-201ENST00000606304 481 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AC096586.1-201ENST00000610267 561 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 AC017104.5-201ENST00000637647 639 ntBASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC50Q8IVM0 SEC63P2-201ENST00000503863 1939 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 SNORD56.4-201ENST00000363883 71 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AL359837.1-201ENST00000381357 287 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 SNORA70E-201ENST00000384492 135 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 PTGES3P2-201ENST00000407942 482 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 UBE2V1P11-201ENST00000411559 285 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 CYCSP19-201ENST00000411715 316 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AL121882.1-201ENST00000422893 417 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 BX276092.4-201ENST00000452056 248 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC097262.1-201ENST00000452559 548 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC015724.1-201ENST00000478577 156 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 MTND2P31-201ENST00000512602 616 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AP004242.1-201ENST00000533701 349 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AP000916.1-201ENST00000533869 835 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 OR4H12P-201ENST00000556269 907 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC079148.1-201ENST00000565944 819 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 ATP5F1P7-201ENST00000567330 760 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC090312.2-201ENST00000582687 378 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 YWHAQP7-201ENST00000603536 658 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC245100.7-201ENST00000609678 442 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC097460.3-201ENST00000623099 442 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AL356118.1-201ENST00000635272 1078 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC091152.2-201ENST00000591628 2569 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC008264.2-201ENST00000610193 3731 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC032011.1-201ENST00000611703 1549 ntBASIC3.6□□□□□ -1.83
CCDC50Q8IVM0 AC004972.1-201ENST00000623934 2209 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 RNU6-1339P-201ENST00000363574 91 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 AL445189.1-201ENST00000405722 338 ntBASIC3.59□□□□□ -1.83
CCDC50Q8IVM0 SNORA11C-201ENST00000408532 129 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms