Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 TAB3P1-202ENST00000452645 1634 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 PARD3-204ENST00000374768 799 ntTSL 3 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 SNORA3.2-201ENST00000408221 125 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 RPL30P2-201ENST00000414021 291 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 RPL21P99-201ENST00000480369 423 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 HMGN2P47-201ENST00000559378 272 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AC233280.2-201ENST00000603917 1070 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AC079228.1-201ENST00000624774 1049 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 RPL7P25-201ENST00000404151 721 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AP000942.3-201ENST00000603702 160 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 MIR26A1-201ENST00000362205 77 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 MIR518C-201ENST00000384822 101 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AL139039.1-201ENST00000401900 692 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 MTCYBP14-201ENST00000457471 715 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AP000942.1-201ENST00000463969 747 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC126121.1-201ENST00000482313 553 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AP001646.1-201ENST00000527936 915 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC007424.1-203ENST00000554613 687 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC103810.6-201ENST00000606708 136 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC009039.2-201ENST00000624524 529 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 RNA5SP322-201ENST00000363617 119 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC110754.1-201ENST00000399740 601 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 ISCA1P2-201ENST00000438679 421 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 SNORA31.21-201ENST00000517180 77 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC015911.5-201ENST00000587076 451 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC006272.2-201ENST00000594725 163 ntBASIC1.94□□□□□ -2.1
CSMD3Q7Z407 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.94□□□□□ -2.1
CSMD3Q7Z407 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 SCARNA17.1-201ENST00000516211 143 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 SCARNA17.2-201ENST00000516334 143 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AP003102.1-201ENST00000525638 661 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 SCARNA17.4-201ENST00000614296 143 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AL138827.1-201ENST00000402666 306 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 RN7SKP192-201ENST00000411291 327 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 RANP7-201ENST00000418085 644 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 MTCO1P52-201ENST00000433928 531 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 USP8P1-201ENST00000494673 3183 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AC063923.1-201ENST00000478982 1619 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 GLRXP1-201ENST00000423261 334 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 MIR1273D-201ENST00000577266 86 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AL158196.1-201ENST00000616786 434 ntBASIC1.93□□□□□ -2.1
CSMD3Q7Z407 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CSMD3Q7Z407 AC026523.2-201ENST00000625039 7739 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms