Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SCXQ7RTU7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SCXQ7RTU7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SCXQ7RTU7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 RPL7P26-201ENST00000333817 754 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 RNA5SP119-201ENST00000362715 117 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 SNORD3H-201ENST00000384486 214 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 RPS3AP25-201ENST00000411660 793 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC093578.1-201ENST00000415219 368 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AL035423.1-201ENST00000420331 213 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 ETF1P3-201ENST00000430422 1160 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 HMGN2P31-201ENST00000432430 273 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 ATP5HP2-201ENST00000433885 485 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 HMGB1P37-201ENST00000439613 609 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC004865.1-201ENST00000442276 1003 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 SETD6P1-201ENST00000444575 317 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 HMGB1P15-201ENST00000453854 435 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 RPS15AP1-201ENST00000457423 391 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AL133162.1-201ENST00000463228 453 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AP002884.2-201ENST00000471647 395 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC026784.1-201ENST00000507986 352 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC010265.1-201ENST00000513509 211 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 RN7SKP83-201ENST00000516512 178 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 RNA5SP164-201ENST00000516533 110 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 SNORA31.20-201ENST00000517111 133 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 DUXAP2-201ENST00000519198 589 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 CR383656.14-201ENST00000551951 406 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AL121576.1-201ENST00000556055 276 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC005951.1-201ENST00000576706 485 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC019176.2-201ENST00000611579 315 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC006963.1-201ENST00000624003 1052 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC091905.1-201ENST00000624400 311 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 AC092608.3-201ENST00000625017 386 ntBASIC2.43□□□□□ -2.02
SCXQ7RTU7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SCXQ7RTU7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.43□□□□□ -2.02
SCXQ7RTU7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC004925.1-201ENST00000624256 2706 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 PWAR6-201ENST00000552334 4618 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 RNU6-1339P-201ENST00000363574 91 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 Y_RNA.333-201ENST00000365274 102 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 RNA5SP235-201ENST00000365411 114 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 RNU6-761P-201ENST00000384148 107 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC109780.2-201ENST00000413467 845 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 RPS29P4-201ENST00000414733 161 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 AC127526.1-201ENST00000417526 366 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 YPEL5P1-201ENST00000419731 367 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 RPL7P46-201ENST00000425129 740 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 TRIAP1P1-201ENST00000427062 225 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 MTND4LP7-201ENST00000431728 294 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 ZFAND6P1-201ENST00000434138 605 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 Z74696.2-201ENST00000436514 498 ntBASIC2.42□□□□□ -2.02
SCXQ7RTU7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.42□□□□□ -2.02
SCXQ7RTU7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms