Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC011890.2-201ENST00000613393 294 ntBASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 AC125336.1-201ENST00000508893 2827 ntBASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXR1Q6PIV2 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AC002525.1-201ENST00000624392 1622 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 Y_RNA.288-201ENST00000364854 92 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AL157702.1-201ENST00000398764 426 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 Z93019.1-201ENST00000416450 973 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 RPL21P50-201ENST00000417698 477 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AC139712.2-201ENST00000424302 339 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 RPSAP65-201ENST00000429660 595 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 RPL23AP12-201ENST00000467573 473 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 RN7SL214P-201ENST00000487317 265 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 RNU6-120P-201ENST00000516077 103 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 RNU6-256P-201ENST00000516747 97 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 PMS2P3-207ENST00000529061 717 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 TXNP4-201ENST00000575018 310 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AC138761.3-201ENST00000579993 334 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AC020916.2-201ENST00000591242 360 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 AC078899.3-201ENST00000599065 212 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 MIR4302-201ENST00000638058 60 ntBASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
FOXR1Q6PIV2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AL731566.1-201ENST00000620490 1937 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 DDX18P4-201ENST00000511690 1966 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 RN7SKP145-201ENST00000363291 303 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 Y_RNA.350-201ENST00000365409 98 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 RHOT1P2-201ENST00000366423 333 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 Y_RNA.477-201ENST00000384352 108 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 MIR320B1-201ENST00000390209 79 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AL445529.1-201ENST00000398713 389 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AL034374.1-201ENST00000406329 351 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 RN7SKP281-201ENST00000410472 352 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AL359092.1-201ENST00000417156 265 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AL139396.1-201ENST00000421137 167 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 PSMA6P3-201ENST00000428242 164 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 RPL21P91-201ENST00000429231 479 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 PNKDP1-201ENST00000435914 430 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AC004980.3-201ENST00000447046 365 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 HLA-DPA3-207ENST00000454398 229 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AC021205.1-201ENST00000468797 348 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 SCARNA21.2-201ENST00000516600 166 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 RN7SKP283-201ENST00000517197 270 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AC090136.1-201ENST00000520009 240 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AC079905.1-201ENST00000549280 475 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 HMGB3P26-201ENST00000560051 582 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 SNORD39.3-201ENST00000584451 71 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 AC008507.3-201ENST00000585753 472 ntBASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXR1Q6PIV2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms