Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC012314.7-201ENST00000619693 93 ntBASIC4.4□□□□□ -1.71
PDS5AQ29RF7 AC013470.4-201ENST00000619978 986 ntBASIC4.4□□□□□ -1.71
PDS5AQ29RF7 AC244100.1-202ENST00000621554 382 ntBASIC4.4□□□□□ -1.71
PDS5AQ29RF7 AP003485.2-201ENST00000623636 610 ntBASIC4.4□□□□□ -1.71
PDS5AQ29RF7 BMS1P21-201ENST00000634565 365 ntBASIC4.4□□□□□ -1.71
PDS5AQ29RF7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
PDS5AQ29RF7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 MTCO1P6-201ENST00000481192 1384 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC019155.1-201ENST00000382242 574 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 RNU6-225P-201ENST00000384613 103 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 MIR525-201ENST00000384978 85 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 HMGB3P20-201ENST00000417997 600 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC009263.1-201ENST00000441193 1239 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 PRDX3P3-201ENST00000447765 522 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC069528.1-202ENST00000482888 637 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC145350.1-201ENST00000567426 208 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 MTCO1P40-201ENST00000574371 625 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC009948.4-201ENST00000604692 675 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 MIR7973-1-201ENST00000614683 76 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 MIR7975-201ENST00000619350 68 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC091905.1-201ENST00000624400 311 ntBASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.39□□□□□ -1.71
PDS5AQ29RF7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 MFSD8-233ENST00000641482 4860 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL031985.3-201ENST00000565390 2449 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 MTND4P10-201ENST00000446199 1363 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC007685.1-201ENST00000329806 452 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 RNU6-1339P-201ENST00000363574 91 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 RNU1-89P-201ENST00000384592 164 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 MIR218-2-201ENST00000385006 110 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 RPS6P15-201ENST00000431996 751 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 NDUFB1P1-201ENST00000435191 180 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 RPL7P28-201ENST00000437739 740 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL929288.2-201ENST00000446368 407 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 NPM1P13-201ENST00000452663 865 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 UBA52P3-201ENST00000491303 382 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC107016.1-201ENST00000550463 337 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 HMGB3P26-201ENST00000560051 582 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC022884.3-201ENST00000579571 248 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC005412.1-201ENST00000580812 1049 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC015688.2-201ENST00000584523 262 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 VN1R78P-201ENST00000597393 564 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 BNIP3P4-201ENST00000604946 565 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 HMGB1P50-201ENST00000605814 607 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL583856.2-201ENST00000606298 543 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 MIR7851-201ENST00000610611 160 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC092106.3-201ENST00000611308 722 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC079416.3-201ENST00000624479 549 ntBASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
PDS5AQ29RF7 AL392088.2-201ENST00000637607 285 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms